RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 TGP01266 2768 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 A0A1W2PPM1 405 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 KIF2AO00139 706 aaPredicted RBP8.86□□□□□ -0.99
SCFD1-220ENST00000556486 LSM1O15116 133 aaKnown RBP8.86□□□□□ -0.99
SCFD1-220ENST00000556486 CXCL13O43927 109 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 RAMP1O60894 148 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 CRCPO75575 148 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 CD8AP01732 235 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 FGF4P08620 206 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 DDX5P17844 614 aaKnown RBP8.86□□□□□ -0.99
SCFD1-220ENST00000556486 IGFBP5P24593 272 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 GATA4P43694 442 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 ASMTP46597 345 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 RFX3P48380 749 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 NUDT6P53370 316 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 SUMO3P55854 103 aaPredicted RBP8.86□□□□□ -0.99
SCFD1-220ENST00000556486 P2RY6Q15077 328 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 CD226Q15762 336 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 RFTN2Q52LD8 501 aaPredicted RBP8.86□□□□□ -0.99
SCFD1-220ENST00000556486 CFAP157Q5JU67 520 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 PDSS1Q5T2R2 415 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 LIPMQ5VYY2 423 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 HBMQ6B0K9 141 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 TFAP2EQ6VUC0 442 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 LILRA2Q8N149 483 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 OR2T11Q8NH01 316 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 ROBO4Q8WZ75 1007 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 SLC9A6Q92581 669 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 CPNE4Q96A23 557 aaPredicted RBP8.86□□□□□ -0.99
SCFD1-220ENST00000556486 RAX2Q96IS3 184 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 KLHL15Q96M94 604 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 TNFRSF13CQ96RJ3 184 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 TACO1Q9BSH4 297 aaKnown RBP8.86□□□□□ -0.99
SCFD1-220ENST00000556486 BTBD2Q9BX70 525 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 TUBB1Q9H4B7 451 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 TIGARQ9NQ88 270 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 SIRT3Q9NTG7 399 aaPredicted RBP8.86□□□□□ -0.99
SCFD1-220ENST00000556486 KLHL13Q9P2N7 655 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 ICAM5Q9UMF0 924 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 SNX8Q9Y5X2 465 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 CADP27708 2225 aa8.86□□□□□ -0.99
SCFD1-220ENST00000556486 NPIPB9F8W1W9 429 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 TNFSF11O14788 317 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 AZIN1O14977 448 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 EFNA2O43921 213 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 PIP5K1CO60331 668 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 F13BP05160 661 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 LPLP06858 475 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 ALOX5P09917 674 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 CPA3P15088 417 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 HPGDP15428 266 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 PRIM2P49643 509 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 CARD18P57730 90 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 C21orf58P58505 322 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 BSPH1Q075Z2 132 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 PGS1Q32NB8 556 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 FAM153CQ494X1 144 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 ZNF672Q499Z4 452 aaPredicted RBP8.85□□□□□ -0.99
SCFD1-220ENST00000556486 KLHL26Q53HC5 615 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 SLC25A53Q5H9E4 307 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 KANK2Q63ZY3 851 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 CLEC6AQ6EIG7 209 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 ANKRD26P1Q6NSI1 321 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 LRIG3Q6UXM1 1119 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 SSX8Q7RTT4 187 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 R3HCC1LQ7Z5L2 792 aaKnown RBP8.85□□□□□ -0.99
SCFD1-220ENST00000556486 SLC43A2Q8N370 569 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 NATD1Q8N6N6 113 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 ZNF525Q8N782 197 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 COX18Q8N8Q8 333 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 B4GALNT2Q8NHY0 566 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 OSTF1Q92882 214 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 FAM120BQ96EK7 910 aaKnown RBP8.85□□□□□ -0.99
SCFD1-220ENST00000556486 JMJD8Q96S16 334 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 KLHDC3Q9BQ90 382 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 TRAF4Q9BUZ4 470 aaPredicted RBP8.85□□□□□ -0.99
SCFD1-220ENST00000556486 HOXD1Q9GZZ0 328 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 PIGUQ9H490 435 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 BCO1Q9HAY6 547 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 NGBQ9NPG2 151 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 FBXO34Q9NWN3 711 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 TBK1Q9UHD2 729 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 ATP6V1HQ9UI12 483 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 MID2Q9UJV3 735 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 B3GALT5Q9Y2C3 310 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 DNAJC15Q9Y5T4 150 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 PTGDR2Q9Y5Y4 395 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 FREM1Q5H8C1 2179 aa8.85□□□□□ -0.99
SCFD1-220ENST00000556486 DYSFO75923 2080 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 GOLGA8QA0A0J9YX86 632 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 GOLGA8OA6NCC3 632 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 GJE1A6NN92 205 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 GOLGA8NF8WBI6 632 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 HMGN2P05204 90 aaKnown RBP8.84□□□□□ -0.99
SCFD1-220ENST00000556486 IGHV4-31P0DP07 118 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 BCKDHAP12694 445 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 CFPP27918 469 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 SHC1P29353 583 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 RPL3P39023 403 aaKnown RBP8.84□□□□□ -0.99
SCFD1-220ENST00000556486 P2RX1P51575 399 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms