RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 ZNF100Q8IYN0 542 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 CLECL1Q8IZS7 167 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 DEPDC4Q8N2C3 294 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 TMCO5AQ8N6Q1 288 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 GLB1L3Q8NCI6 653 aaPredicted RBP6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 ATP6V1C2Q8NEY4 427 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 OR4A15Q8NGL6 344 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 OR5AK3PQ8NH89 298 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 ZNF563Q8TA94 476 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 CCDC115Q96NT0 180 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 NAA11Q9BSU3 229 aaPredicted RBP6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 TRAF4Q9BUZ4 470 aaPredicted RBP6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 SF3B5Q9BWJ5 86 aaKnown RBP6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 REG4Q9BYZ8 158 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 ALG2Q9H553 416 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 MEAF6Q9HAF1 191 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 ASB6Q9NWX5 421 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 TAS2R16Q9NYV7 291 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 TMEM181Q9P2C4 612 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 MARCOQ9UEW3 520 aaPredicted RBP6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 NOSIPQ9Y314 301 aaKnown RBP6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 TLN2Q9Y4G6 2542 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 ANK3Q12955 4377 aaKnown RBP6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 ABCA1O95477 2261 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 IGHV3-15A0A0B4J1V0 119 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 FAM234BA2RU67 622 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 AGAP5A6NIR3 686 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 SHISA9B4DS77 424 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 E9PBE3 544 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 PDLIM1O00151 329 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 HMGN4O00479 90 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 SMAD7O15105 426 aaKnown RBP6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 CLOCKO15516 846 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 MRPL33O75394 65 aaKnown RBP6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 CYP7B1O75881 506 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 VAMP5O95183 116 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 CPSF4O95639 269 aaKnown RBP6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 KRT75O95678 551 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 CD8AP01732 235 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 PGRP06401 933 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 BMP4P12644 408 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 UQCRBP14927 111 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 SLC1A3P43003 542 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 KHKP50053 298 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 SLC35A1P78382 337 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 HPCAP84074 193 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 TGFBR3Q03167 851 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 CHRNEQ04844 493 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 BSPH1Q075Z2 132 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 NDUFAF6Q330K2 333 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 KRT71Q3SY84 523 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 ZNF544Q6NX49 715 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 C17orf78Q8N4C9 275 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 ARFGAP2Q8N6H7 521 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 C1orf162Q8NEQ5 155 aaPredicted RBP6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 SPATA3Q8NHX4 192 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 APH1AQ96BI3 265 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 DDIT4LQ96D03 193 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 ZG16BQ96DA0 208 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 ZNF317Q96PQ6 595 aaPredicted RBP6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 ZNF300Q96RE9 604 aaPredicted RBP6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 SORT1Q99523 831 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 DHRS9Q9BPW9 319 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 SLC35A5Q9BS91 424 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 AMBRA1Q9C0C7 1298 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 C20orf27Q9GZN8 174 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 ADAM19Q9H013 955 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 QRSL1Q9H0R6 528 aaKnown RBP6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 SLCO5A1Q9H2Y9 848 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 CTPS2Q9NRF8 586 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 CBLN4Q9NTU7 201 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 THAP1Q9NVV9 213 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 THUMPD1Q9NXG2 353 aaKnown RBP6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 CALML5Q9NZT1 146 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 MALT1Q9UDY8 824 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 PRSS50Q9UI38 385 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 DCTN4Q9UJW0 460 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 SLC9A8Q9Y2E8 581 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 MAGED1Q9Y5V3 778 aaPredicted RBP6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 SLC25A15Q9Y619 301 aa6.87□□□□□ -1.31
PTCSC3-201ENST00000556013 ALPK2Q86TB3 2170 aa6.86□□□□□ -1.31
PTCSC3-201ENST00000556013 CIB4A0PJX0 185 aa6.86□□□□□ -1.31
PTCSC3-201ENST00000556013 PRAMEF27A3QJZ7 478 aa6.86□□□□□ -1.31
PTCSC3-201ENST00000556013 WDR91A4D1P6 747 aa6.86□□□□□ -1.31
PTCSC3-201ENST00000556013 CCDC154A6NI56 674 aa6.86□□□□□ -1.31
PTCSC3-201ENST00000556013 OR6C65A6NJZ3 312 aa6.86□□□□□ -1.31
PTCSC3-201ENST00000556013 TRPC5OSA6NMA1 111 aa6.86□□□□□ -1.31
PTCSC3-201ENST00000556013 HDAC3O15379 428 aa6.86□□□□□ -1.31
PTCSC3-201ENST00000556013 LYZL6O75951 148 aa6.86□□□□□ -1.31
PTCSC3-201ENST00000556013 IL6P05231 212 aa6.86□□□□□ -1.31
PTCSC3-201ENST00000556013 DBIP07108 87 aaKnown RBP6.86□□□□□ -1.31
PTCSC3-201ENST00000556013 ZCCHC18P0CG32 403 aa6.86□□□□□ -1.31
PTCSC3-201ENST00000556013 TFPIP10646 304 aa6.86□□□□□ -1.31
PTCSC3-201ENST00000556013 HOXB1P14653 301 aaPredicted RBP6.86□□□□□ -1.31
PTCSC3-201ENST00000556013 IL7RP16871 459 aa6.86□□□□□ -1.31
PTCSC3-201ENST00000556013 RPS4Y1P22090 263 aaKnown RBP6.86□□□□□ -1.31
PTCSC3-201ENST00000556013 TTKP33981 857 aa6.86□□□□□ -1.31
PTCSC3-201ENST00000556013 CHI3L1P36222 383 aaPredicted RBP6.86□□□□□ -1.31
PTCSC3-201ENST00000556013 IDH2P48735 452 aaKnown RBP6.86□□□□□ -1.31
PTCSC3-201ENST00000556013 POLR2HP52434 150 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms