RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 ZNF716A6NP11 495 aa17.42■□□□□ 0.38
PRKCH-219ENST00000555906 C9JVG2 144 aa17.42■□□□□ 0.38
PRKCH-219ENST00000555906 TFPIP10646 304 aa17.42■□□□□ 0.38
PRKCH-219ENST00000555906 LBPP18428 481 aa17.42■□□□□ 0.38
PRKCH-219ENST00000555906 IDUAP35475 653 aa17.42■□□□□ 0.38
PRKCH-219ENST00000555906 CHI3L1P36222 383 aaPredicted RBP17.42■□□□□ 0.38
PRKCH-219ENST00000555906 CDKN1AP38936 164 aa17.42■□□□□ 0.38
PRKCH-219ENST00000555906 CLK1P49759 484 aaKnown RBP17.42■□□□□ 0.38
PRKCH-219ENST00000555906 SLC16A1P53985 500 aa17.42■□□□□ 0.38
PRKCH-219ENST00000555906 CDH11P55287 796 aa17.42■□□□□ 0.38
PRKCH-219ENST00000555906 FAM174BQ3ZCQ3 159 aa17.42■□□□□ 0.38
PRKCH-219ENST00000555906 FBXW9Q5XUX1 488 aa17.42■□□□□ 0.38
PRKCH-219ENST00000555906 DTX2Q86UW9 622 aa17.42■□□□□ 0.38
PRKCH-219ENST00000555906 ARFGAP2Q8N6H7 521 aa17.42■□□□□ 0.38
PRKCH-219ENST00000555906 ZNF433Q8N7K0 673 aaPredicted RBP17.42■□□□□ 0.38
PRKCH-219ENST00000555906 ZNF775Q96BV0 537 aaPredicted RBP17.42■□□□□ 0.38
PRKCH-219ENST00000555906 CCDC115Q96NT0 180 aa17.42■□□□□ 0.38
PRKCH-219ENST00000555906 TRAF4Q9BUZ4 470 aaPredicted RBP17.42■□□□□ 0.38
PRKCH-219ENST00000555906 NUF2Q9BZD4 464 aa17.42■□□□□ 0.38
PRKCH-219ENST00000555906 GRIP2Q9C0E4 1043 aa17.42■□□□□ 0.38
PRKCH-219ENST00000555906 MEAF6Q9HAF1 191 aa17.42■□□□□ 0.38
PRKCH-219ENST00000555906 FAIMQ9NVQ4 179 aa17.42■□□□□ 0.38
PRKCH-219ENST00000555906 NPAP1Q9NZP6 1156 aa17.42■□□□□ 0.38
PRKCH-219ENST00000555906 BTNL2Q9UIR0 455 aa17.42■□□□□ 0.38
PRKCH-219ENST00000555906 LIPT1Q9Y234 373 aa17.42■□□□□ 0.38
PRKCH-219ENST00000555906 ABCA1O95477 2261 aa17.42■□□□□ 0.38
PRKCH-219ENST00000555906 SHISA9B4DS77 424 aa17.41■□□□□ 0.38
PRKCH-219ENST00000555906 GPR171O14626 319 aa17.41■□□□□ 0.38
PRKCH-219ENST00000555906 KCNJ10P78508 379 aa17.41■□□□□ 0.38
PRKCH-219ENST00000555906 TXNL4AP83876 142 aaKnown RBP17.41■□□□□ 0.38
PRKCH-219ENST00000555906 GPAT3Q53EU6 434 aa17.41■□□□□ 0.38
PRKCH-219ENST00000555906 CMIPQ8IY22 773 aa17.41■□□□□ 0.38
PRKCH-219ENST00000555906 APH1AQ96BI3 265 aa17.41■□□□□ 0.38
PRKCH-219ENST00000555906 ARL5BQ96KC2 179 aa17.41■□□□□ 0.38
PRKCH-219ENST00000555906 SLCO5A1Q9H2Y9 848 aa17.41■□□□□ 0.38
PRKCH-219ENST00000555906 ALG2Q9H553 416 aa17.41■□□□□ 0.38
PRKCH-219ENST00000555906 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.41■□□□□ 0.38
PRKCH-219ENST00000555906 MALT1Q9UDY8 824 aa17.41■□□□□ 0.38
PRKCH-219ENST00000555906 NOSIPQ9Y314 301 aaKnown RBP17.41■□□□□ 0.38
PRKCH-219ENST00000555906 PRAMEF27A3QJZ7 478 aa17.4■□□□□ 0.38
PRKCH-219ENST00000555906 RNF223E7ERA6 249 aa17.4■□□□□ 0.38
PRKCH-219ENST00000555906 HMGN4O00479 90 aa17.4■□□□□ 0.38
PRKCH-219ENST00000555906 ABCD4O14678 606 aa17.4■□□□□ 0.38
PRKCH-219ENST00000555906 ADAM11O75078 769 aa17.4■□□□□ 0.38
PRKCH-219ENST00000555906 RAD51DO75771 328 aa17.4■□□□□ 0.38
PRKCH-219ENST00000555906 IGHV4-39P01824 125 aa17.4■□□□□ 0.38
PRKCH-219ENST00000555906 BGNP21810 368 aa17.4■□□□□ 0.38
PRKCH-219ENST00000555906 S100A3P33764 101 aa17.4■□□□□ 0.38
PRKCH-219ENST00000555906 RYKP34925 604 aa17.4■□□□□ 0.38
PRKCH-219ENST00000555906 HTR3AP46098 478 aa17.4■□□□□ 0.38
PRKCH-219ENST00000555906 CHRNEQ04844 493 aa17.4■□□□□ 0.38
PRKCH-219ENST00000555906 DMTNQ08495 405 aa17.4■□□□□ 0.38
PRKCH-219ENST00000555906 FAPQ12884 760 aa17.4■□□□□ 0.38
PRKCH-219ENST00000555906 TRIML2Q8N7C3 387 aa17.4■□□□□ 0.38
PRKCH-219ENST00000555906 RADILQ96JH8 1075 aa17.4■□□□□ 0.38
PRKCH-219ENST00000555906 TRNT1Q96Q11 434 aaKnown RBP17.4■□□□□ 0.38
PRKCH-219ENST00000555906 BARX1Q9HBU1 254 aaPredicted RBP17.4■□□□□ 0.38
PRKCH-219ENST00000555906 AIG1Q9NVV5 245 aa17.4■□□□□ 0.38
PRKCH-219ENST00000555906 CISD1Q9NZ45 108 aaKnown RBP17.4■□□□□ 0.38
PRKCH-219ENST00000555906 ATRQ13535 2644 aa17.4■□□□□ 0.38
PRKCH-219ENST00000555906 CLDN24A6NM45 220 aa17.39■□□□□ 0.37
PRKCH-219ENST00000555906 KIAA1324LA8MWY0 1029 aaPredicted RBP17.39■□□□□ 0.37
PRKCH-219ENST00000555906 RAMP1O60894 148 aa17.39■□□□□ 0.37
PRKCH-219ENST00000555906 ANXA11P50995 505 aaKnown RBP17.39■□□□□ 0.37
PRKCH-219ENST00000555906 DNM1P46Q6ZS02 220 aa17.39■□□□□ 0.37
PRKCH-219ENST00000555906 HMGN2P46Q86SG4 172 aa17.39■□□□□ 0.37
PRKCH-219ENST00000555906 RNF130Q86XS8 419 aa17.39■□□□□ 0.37
PRKCH-219ENST00000555906 ADGRG3Q86Y34 549 aa17.39■□□□□ 0.37
PRKCH-219ENST00000555906 UBE2J2Q8N2K1 259 aa17.39■□□□□ 0.37
PRKCH-219ENST00000555906 ZG16BQ96DA0 208 aa17.39■□□□□ 0.37
PRKCH-219ENST00000555906 OR11A1Q9GZK7 315 aa17.39■□□□□ 0.37
PRKCH-219ENST00000555906 SLC38A1Q9H2H9 487 aa17.39■□□□□ 0.37
PRKCH-219ENST00000555906 TAS2R16Q9NYV7 291 aa17.39■□□□□ 0.37
PRKCH-219ENST00000555906 AGAP5A6NIR3 686 aa17.38■□□□□ 0.37
PRKCH-219ENST00000555906 FAAHO00519 579 aa17.38■□□□□ 0.37
PRKCH-219ENST00000555906 CD8AP01732 235 aa17.38■□□□□ 0.37
PRKCH-219ENST00000555906 IGHV3-9P01782 118 aa17.38■□□□□ 0.37
PRKCH-219ENST00000555906 CHRM4P08173 479 aa17.38■□□□□ 0.37
PRKCH-219ENST00000555906 ALDOCP09972 364 aaKnown RBP17.38■□□□□ 0.37
PRKCH-219ENST00000555906 RPS4Y1P22090 263 aaKnown RBP17.38■□□□□ 0.37
PRKCH-219ENST00000555906 ACVR1BP36896 505 aa17.38■□□□□ 0.37
PRKCH-219ENST00000555906 IDH2P48735 452 aaKnown RBP17.38■□□□□ 0.37
PRKCH-219ENST00000555906 LRRC74AQ0VAA2 488 aa17.38■□□□□ 0.37
PRKCH-219ENST00000555906 STX3Q13277 289 aa17.38■□□□□ 0.37
PRKCH-219ENST00000555906 TNFAIP8L3Q5GJ75 292 aa17.38■□□□□ 0.37
PRKCH-219ENST00000555906 TMEM108Q6UXF1 575 aa17.38■□□□□ 0.37
PRKCH-219ENST00000555906 CNOT9Q92600 299 aaKnown RBP17.38■□□□□ 0.37
PRKCH-219ENST00000555906 TEX37Q96LM6 180 aa17.38■□□□□ 0.37
PRKCH-219ENST00000555906 HS6ST2Q96MM7 605 aa17.38■□□□□ 0.37
PRKCH-219ENST00000555906 PANX1Q96RD7 426 aa17.38■□□□□ 0.37
PRKCH-219ENST00000555906 REG4Q9BYZ8 158 aa17.38■□□□□ 0.37
PRKCH-219ENST00000555906 ASB6Q9NWX5 421 aa17.38■□□□□ 0.37
PRKCH-219ENST00000555906 TMEM181Q9P2C4 612 aa17.38■□□□□ 0.37
PRKCH-219ENST00000555906 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.38■□□□□ 0.37
PRKCH-219ENST00000555906 MGAT4BQ9UQ53 548 aa17.38■□□□□ 0.37
PRKCH-219ENST00000555906 TRAPPC4Q9Y296 219 aa17.38■□□□□ 0.37
PRKCH-219ENST00000555906 SLC25A15Q9Y619 301 aa17.38■□□□□ 0.37
PRKCH-219ENST00000555906 V9GYY5 206 aaPredicted RBP17.38■□□□□ 0.37
PRKCH-219ENST00000555906 TMED7-TICAM2A0A0A6YYA0 188 aa17.37■□□□□ 0.37
PRKCH-219ENST00000555906 CIB4A0PJX0 185 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms