RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 ADGRG3Q86Y34 549 aa12.25□□□□□ -0.45
PCNX4-209ENST00000555569 PEX5LQ8IYB4 626 aa12.25□□□□□ -0.45
PCNX4-209ENST00000555569 WDR60Q8WVS4 1066 aa12.25□□□□□ -0.45
PCNX4-209ENST00000555569 PMM1Q92871 262 aa12.25□□□□□ -0.45
PCNX4-209ENST00000555569 ZNF775Q96BV0 537 aaPredicted RBP12.25□□□□□ -0.45
PCNX4-209ENST00000555569 ZHX1-C8orf76Q96EF9 292 aa12.25□□□□□ -0.45
PCNX4-209ENST00000555569 OR52B2Q96RD2 323 aa12.25□□□□□ -0.45
PCNX4-209ENST00000555569 TMEM204Q9BSN7 226 aa12.25□□□□□ -0.45
PCNX4-209ENST00000555569 SDR39U1Q9NRG7 319 aaPredicted RBP12.25□□□□□ -0.45
PCNX4-209ENST00000555569 SLC6A13Q9NSD5 602 aa12.25□□□□□ -0.45
PCNX4-209ENST00000555569 P2RX2Q9UBL9 471 aa12.25□□□□□ -0.45
PCNX4-209ENST00000555569 PRSS50Q9UI38 385 aa12.25□□□□□ -0.45
PCNX4-209ENST00000555569 HDGFL3Q9Y3E1 203 aa12.25□□□□□ -0.45
PCNX4-209ENST00000555569 VPS13CQ709C8 3753 aa12.25□□□□□ -0.45
PCNX4-209ENST00000555569 ANP32DO95626 131 aa12.24□□□□□ -0.45
PCNX4-209ENST00000555569 DBIP07108 87 aaKnown RBP12.24□□□□□ -0.45
PCNX4-209ENST00000555569 ZCCHC18P0CG32 403 aa12.24□□□□□ -0.45
PCNX4-209ENST00000555569 IL7RP16871 459 aa12.24□□□□□ -0.45
PCNX4-209ENST00000555569 HTR3AP46098 478 aa12.24□□□□□ -0.45
PCNX4-209ENST00000555569 CLK1P49759 484 aaKnown RBP12.24□□□□□ -0.45
PCNX4-209ENST00000555569 POLR2JP52435 117 aaKnown RBP12.24□□□□□ -0.45
PCNX4-209ENST00000555569 ITGADQ13349 1161 aa12.24□□□□□ -0.45
PCNX4-209ENST00000555569 PDK3Q15120 406 aa12.24□□□□□ -0.45
PCNX4-209ENST00000555569 Q5PR19 223 aa12.24□□□□□ -0.45
PCNX4-209ENST00000555569 MRPL2Q5T653 305 aaKnown RBP12.24□□□□□ -0.45
PCNX4-209ENST00000555569 BHLHA15Q7RTS1 189 aaPredicted RBP12.24□□□□□ -0.45
PCNX4-209ENST00000555569 GALNT5Q7Z7M9 940 aa12.24□□□□□ -0.45
PCNX4-209ENST00000555569 HSD17B8Q92506 261 aa12.24□□□□□ -0.45
PCNX4-209ENST00000555569 DNAJA3Q96EY1 480 aa12.24□□□□□ -0.45
PCNX4-209ENST00000555569 ITCHQ96J02 903 aa12.24□□□□□ -0.45
PCNX4-209ENST00000555569 ARL5BQ96KC2 179 aa12.24□□□□□ -0.45
PCNX4-209ENST00000555569 USB1Q9BQ65 265 aaKnown RBP12.24□□□□□ -0.45
PCNX4-209ENST00000555569 OR11A1Q9GZK7 315 aa12.24□□□□□ -0.45
PCNX4-209ENST00000555569 GSX1Q9H4S2 264 aaPredicted RBP12.24□□□□□ -0.45
PCNX4-209ENST00000555569 RMND5AQ9H871 391 aa12.24□□□□□ -0.45
PCNX4-209ENST00000555569 NGBQ9NPG2 151 aa12.24□□□□□ -0.45
PCNX4-209ENST00000555569 CALML5Q9NZT1 146 aa12.24□□□□□ -0.45
PCNX4-209ENST00000555569 EMC3Q9P0I2 261 aa12.24□□□□□ -0.45
PCNX4-209ENST00000555569 IGKV3D-15A0A087WSY6 115 aa12.23□□□□□ -0.45
PCNX4-209ENST00000555569 TMED7-TICAM2A0A0A6YYA0 188 aa12.23□□□□□ -0.45
PCNX4-209ENST00000555569 FAAHO00519 579 aa12.23□□□□□ -0.45
PCNX4-209ENST00000555569 HS3ST1O14792 307 aa12.23□□□□□ -0.45
PCNX4-209ENST00000555569 DNPH1O43598 174 aa12.23□□□□□ -0.45
PCNX4-209ENST00000555569 ETFAP13804 333 aa12.23□□□□□ -0.45
PCNX4-209ENST00000555569 CCNA2P20248 432 aa12.23□□□□□ -0.45
PCNX4-209ENST00000555569 EDNRAP25101 427 aa12.23□□□□□ -0.45
PCNX4-209ENST00000555569 CRATP43155 626 aa12.23□□□□□ -0.45
PCNX4-209ENST00000555569 POLR2HP52434 150 aaKnown RBP12.23□□□□□ -0.45
PCNX4-209ENST00000555569 MVDP53602 400 aa12.23□□□□□ -0.45
PCNX4-209ENST00000555569 OR2B6P58173 313 aa12.23□□□□□ -0.45
PCNX4-209ENST00000555569 EPS8Q12929 822 aa12.23□□□□□ -0.45
PCNX4-209ENST00000555569 CAPRIN1Q14444 709 aaKnown RBP12.23□□□□□ -0.45
PCNX4-209ENST00000555569 TAB1Q15750 504 aa12.23□□□□□ -0.45
PCNX4-209ENST00000555569 MAPK11Q15759 364 aa12.23□□□□□ -0.45
PCNX4-209ENST00000555569 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.23□□□□□ -0.45
PCNX4-209ENST00000555569 ZNF440Q8IYI8 595 aa12.23□□□□□ -0.45
PCNX4-209ENST00000555569 ZNF100Q8IYN0 542 aa12.23□□□□□ -0.45
PCNX4-209ENST00000555569 MIER2Q8N344 545 aa12.23□□□□□ -0.45
PCNX4-209ENST00000555569 OR9I1Q8NGQ6 314 aa12.23□□□□□ -0.45
PCNX4-209ENST00000555569 PIGXQ8TBF5 258 aa12.23□□□□□ -0.45
PCNX4-209ENST00000555569 PERPQ96FX8 193 aa12.23□□□□□ -0.45
PCNX4-209ENST00000555569 C18orf12Q96KH6 178 aa12.23□□□□□ -0.45
PCNX4-209ENST00000555569 POTEKPQ9BYX7 375 aa12.23□□□□□ -0.45
PCNX4-209ENST00000555569 TPT1P8Q9HAU6 139 aa12.23□□□□□ -0.45
PCNX4-209ENST00000555569 OSGIN1Q9UJX0 560 aa12.23□□□□□ -0.45
PCNX4-209ENST00000555569 TMED7Q9Y3B3 224 aa12.23□□□□□ -0.45
PCNX4-209ENST00000555569 USH1CQ9Y6N9 552 aa12.23□□□□□ -0.45
PCNX4-209ENST00000555569 TMEM72A0PK05 275 aa12.22□□□□□ -0.45
PCNX4-209ENST00000555569 FAM234BA2RU67 622 aa12.22□□□□□ -0.45
PCNX4-209ENST00000555569 CFAP73A6NFT4 308 aa12.22□□□□□ -0.45
PCNX4-209ENST00000555569 ZNF208O43345 1280 aa12.22□□□□□ -0.45
PCNX4-209ENST00000555569 LYZL6O75951 148 aa12.22□□□□□ -0.45
PCNX4-209ENST00000555569 CNOT4O95628 575 aaKnown RBP12.22□□□□□ -0.45
PCNX4-209ENST00000555569 BCHEP06276 602 aa12.22□□□□□ -0.45
PCNX4-209ENST00000555569 CD3EP07766 207 aa12.22□□□□□ -0.45
PCNX4-209ENST00000555569 UQCRBP14927 111 aa12.22□□□□□ -0.45
PCNX4-209ENST00000555569 TACR3P29371 465 aa12.22□□□□□ -0.45
PCNX4-209ENST00000555569 SLC1A3P43003 542 aa12.22□□□□□ -0.45
PCNX4-209ENST00000555569 DSTNP60981 165 aa12.22□□□□□ -0.45
PCNX4-209ENST00000555569 GTDC1Q4AE62 458 aa12.22□□□□□ -0.45
PCNX4-209ENST00000555569 LIN52Q52LA3 116 aa12.22□□□□□ -0.45
PCNX4-209ENST00000555569 C6orf10Q5SRN2 563 aa12.22□□□□□ -0.45
PCNX4-209ENST00000555569 NCMAPQ5T1S8 102 aa12.22□□□□□ -0.45
PCNX4-209ENST00000555569 EPGNQ6UW88 154 aa12.22□□□□□ -0.45
PCNX4-209ENST00000555569 PRSS57Q6UWY2 283 aa12.22□□□□□ -0.45
PCNX4-209ENST00000555569 YTHDF3Q7Z739 585 aaKnown RBP12.22□□□□□ -0.45
PCNX4-209ENST00000555569 BIVMQ86UB2 503 aa12.22□□□□□ -0.45
PCNX4-209ENST00000555569 VRK2Q86Y07 508 aa12.22□□□□□ -0.45
PCNX4-209ENST00000555569 ZNF611Q8N823 705 aa12.22□□□□□ -0.45
PCNX4-209ENST00000555569 OR52P1PQ8NH57 321 aa12.22□□□□□ -0.45
PCNX4-209ENST00000555569 TMEM171Q8WVE6 324 aa12.22□□□□□ -0.45
PCNX4-209ENST00000555569 IGFBPL1Q8WX77 278 aa12.22□□□□□ -0.45
PCNX4-209ENST00000555569 AKAP1Q92667 903 aaKnown RBP eCLIP12.22□□□□□ -0.45
PCNX4-209ENST00000555569 VPS33AQ96AX1 596 aa12.22□□□□□ -0.45
PCNX4-209ENST00000555569 DDIT4LQ96D03 193 aa12.22□□□□□ -0.45
PCNX4-209ENST00000555569 AURKBQ96GD4 344 aaPredicted RBP12.22□□□□□ -0.45
PCNX4-209ENST00000555569 C7orf26Q96N11 449 aa12.22□□□□□ -0.45
PCNX4-209ENST00000555569 GSX2Q9BZM3 304 aa12.22□□□□□ -0.45
PCNX4-209ENST00000555569 TMEM181Q9P2C4 612 aa12.22□□□□□ -0.45
PCNX4-209ENST00000555569 TRAPPC4Q9Y296 219 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms