RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 PRKXP51817 358 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 RAP1BP61224 184 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 CSTF1Q05048 431 aaKnown RBP2.05□□□□□ -2.08
SCFD1-216ENST00000555550 MOBPQ13875 183 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 GAMTQ14353 236 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 PSG5Q15238 335 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 SLC5A12Q1EHB4 618 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 CCDC57Q2TAC2 916 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 C1orf100Q5SVJ3 147 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 ERASQ7Z444 233 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 MFSD6LQ8IWD5 586 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 SVOPLQ8N434 492 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 CYB561D1Q8N8Q1 229 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 BRSK1Q8TDC3 778 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 PHF10Q8WUB8 498 aaKnown RBP2.05□□□□□ -2.08
SCFD1-216ENST00000555550 DEDD2Q8WXF8 326 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 SELENOIQ9C0D9 397 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 ROGDIQ9GZN7 287 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 VAT1LQ9HCJ6 419 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 AGPAT5Q9NUQ2 364 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 GNPTGQ9UJJ9 305 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 ALG6Q9Y672 507 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 COL1A2P08123 1366 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 IGHV2-70DA0A0C4DH43 119 aa2.04□□□□□ -2.08
SCFD1-216ENST00000555550 SPAG9O60271 1321 aaKnown RBP2.04□□□□□ -2.08
SCFD1-216ENST00000555550 IGF1P05019 195 aa2.04□□□□□ -2.08
SCFD1-216ENST00000555550 LEPP41159 167 aa2.04□□□□□ -2.08
SCFD1-216ENST00000555550 KPNA2P52292 529 aaKnown RBP2.04□□□□□ -2.08
SCFD1-216ENST00000555550 PARP10Q53GL7 1025 aa2.04□□□□□ -2.08
SCFD1-216ENST00000555550 BOLA3Q53S33 107 aa2.04□□□□□ -2.08
SCFD1-216ENST00000555550 ZNF311Q5JNZ3 666 aa2.04□□□□□ -2.08
SCFD1-216ENST00000555550 C12orf60Q5U649 245 aa2.04□□□□□ -2.08
SCFD1-216ENST00000555550 TMIGD1Q6UXZ0 262 aa2.04□□□□□ -2.08
SCFD1-216ENST00000555550 SYT10Q6XYQ8 523 aa2.04□□□□□ -2.08
SCFD1-216ENST00000555550 ZNF571Q7Z3V5 609 aaPredicted RBP2.04□□□□□ -2.08
SCFD1-216ENST00000555550 LHFPL4Q7Z7J7 247 aa2.04□□□□□ -2.08
SCFD1-216ENST00000555550 TPRA1Q86W33 373 aa2.04□□□□□ -2.08
SCFD1-216ENST00000555550 MISPQ8IVT2 679 aa2.04□□□□□ -2.08
SCFD1-216ENST00000555550 OR10G2Q8NGC3 310 aa2.04□□□□□ -2.08
SCFD1-216ENST00000555550 GIMAP1Q8WWP7 306 aa2.04□□□□□ -2.08
SCFD1-216ENST00000555550 ST8SIA1Q92185 356 aa2.04□□□□□ -2.08
SCFD1-216ENST00000555550 ARPC1AQ92747 370 aa2.04□□□□□ -2.08
SCFD1-216ENST00000555550 RIOK1Q9BRS2 568 aaKnown RBP2.04□□□□□ -2.08
SCFD1-216ENST00000555550 NAT9Q9BTE0 207 aa2.04□□□□□ -2.08
SCFD1-216ENST00000555550 GPR61Q9BZJ8 451 aa2.04□□□□□ -2.08
SCFD1-216ENST00000555550 IFI27L2Q9H2X8 130 aa2.04□□□□□ -2.08
SCFD1-216ENST00000555550 CLSPNQ9HAW4 1339 aa2.04□□□□□ -2.08
SCFD1-216ENST00000555550 LHX9Q9NQ69 397 aa2.04□□□□□ -2.08
SCFD1-216ENST00000555550 SLC25A37Q9NYZ2 338 aa2.04□□□□□ -2.08
SCFD1-216ENST00000555550 AIPL1Q9NZN9 384 aa2.04□□□□□ -2.08
SCFD1-216ENST00000555550 IQANK1A0A1B0GTG1 560 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 VSTM2BA6NLU5 285 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 E9PBE3 544 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 HCRTR1O43613 425 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 LGI1O95970 557 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 TGFAP01135 160 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 OPN1LWP04000 364 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 CYP2B6P20813 491 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 OTX2P32243 289 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 NMUP48645 174 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 YBEYP58557 167 aaPredicted RBP2.03□□□□□ -2.08
SCFD1-216ENST00000555550 CNTN2Q02246 1040 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 HSF2Q03933 536 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 TRIM16LQ309B1 348 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 NSUN5P1Q3KNT7 163 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 KLF17Q5JT82 389 aaPredicted RBP2.03□□□□□ -2.08
SCFD1-216ENST00000555550 RAET1GQ6H3X3 334 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 C11orf71Q6IPW1 123 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 ZNF621Q6ZSS3 439 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 CAMK2N1Q7Z7J9 78 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 SNX32Q86XE0 403 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 ELMOD2Q8IZ81 293 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 C6orf223Q8N319 242 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 CCDC54Q8NEL0 328 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 OR6C4Q8NGE1 309 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 OR9G1Q8NH87 305 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 NANPQ8TBE9 248 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 ACER1Q8TDN7 264 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 MYLPFQ96A32 169 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 SLC6A7Q99884 636 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 SOHLH2Q9NX45 425 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 MGAT4BQ9UQ53 548 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 TRAPPC4Q9Y296 219 aa2.03□□□□□ -2.08
SCFD1-216ENST00000555550 ATP10DQ9P241 1426 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 CARMIL1Q5VZK9 1371 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 HIP1O00291 1037 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 VPS26AO75436 327 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 B3GAT3O94766 335 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 RETP07949 1114 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 PSMA2P25787 234 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 FGF9P31371 208 aaPredicted RBP2.02□□□□□ -2.09
SCFD1-216ENST00000555550 YWHABP31946 246 aaKnown RBP2.02□□□□□ -2.09
SCFD1-216ENST00000555550 SLC26A3P40879 764 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 VDAC2P45880 294 aaPredicted RBP2.02□□□□□ -2.09
SCFD1-216ENST00000555550 EFNB2P52799 333 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 CRISP3P54108 245 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 SPP2Q13103 211 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 FAM83EQ2M2I3 478 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 LINC01620Q4KN68 170 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 C5orf47Q569G3 176 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms