RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 AP2A1O95782 977 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 GNA11P29992 359 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 PBLDP30039 288 aaPredicted RBP3.98□□□□□ -1.77
VRK1-205ENST00000555402 TAGLN2P37802 199 aaKnown RBP3.98□□□□□ -1.77
VRK1-205ENST00000555402 SULT1E1P49888 294 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 MEOX2P50222 304 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 PRR4Q16378 134 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 AANATQ16613 207 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 IMMTQ16891 758 aaKnown RBP3.98□□□□□ -1.77
VRK1-205ENST00000555402 SFT2D3Q587I9 215 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 OR2B11Q5JQS5 317 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 PHYHD1Q5SRE7 291 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 CXCL17Q6UXB2 119 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 UTS2BQ765I0 119 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 ARCQ7LC44 396 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 GPR137CQ8N3F9 429 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 ANKRD49Q8WVL7 239 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 FBXO32Q969P5 355 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 TIMD4Q96H15 378 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 SLC38A2Q96QD8 506 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 TCHPQ9BT92 498 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 C19orf24Q9BVV8 132 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 RAB34Q9BZG1 259 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 SGK2Q9HBY8 427 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 HYPKQ9NX55 129 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 SEC14L3Q9UDX4 400 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 Q9UF83 564 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 CLEC4EQ9ULY5 219 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 VSIG4Q9Y279 399 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 TIMM8AO60220 97 aaPredicted RBP3.97□□□□□ -1.77
VRK1-205ENST00000555402 SLITRK3O94933 977 aa3.97□□□□□ -1.77
VRK1-205ENST00000555402 CAPN1P07384 714 aa3.97□□□□□ -1.77
VRK1-205ENST00000555402 IGLL1P15814 213 aa3.97□□□□□ -1.77
VRK1-205ENST00000555402 NCF2P19878 526 aaPredicted RBP3.97□□□□□ -1.77
VRK1-205ENST00000555402 ZP3P21754 424 aa3.97□□□□□ -1.77
VRK1-205ENST00000555402 SLC26A2P50443 739 aa3.97□□□□□ -1.77
VRK1-205ENST00000555402 PLK1P53350 603 aa3.97□□□□□ -1.77
VRK1-205ENST00000555402 ATP1B3P54709 279 aa3.97□□□□□ -1.77
VRK1-205ENST00000555402 PKNOX1P55347 436 aa3.97□□□□□ -1.77
VRK1-205ENST00000555402 LRRC74AQ0VAA2 488 aa3.97□□□□□ -1.77
VRK1-205ENST00000555402 CCDC173Q0VFZ6 552 aa3.97□□□□□ -1.77
VRK1-205ENST00000555402 LRRC36Q1X8D7 754 aa3.97□□□□□ -1.77
VRK1-205ENST00000555402 KCTD21Q4G0X4 260 aa3.97□□□□□ -1.77
VRK1-205ENST00000555402 MRAPQ8TCY5 172 aa3.97□□□□□ -1.77
VRK1-205ENST00000555402 HTR3CQ8WXA8 447 aa3.97□□□□□ -1.77
VRK1-205ENST00000555402 CLCC1Q96S66 551 aa3.97□□□□□ -1.77
VRK1-205ENST00000555402 GAL3ST1Q99999 423 aa3.97□□□□□ -1.77
VRK1-205ENST00000555402 ZNF670Q9BS34 389 aa3.97□□□□□ -1.77
VRK1-205ENST00000555402 CNPY3Q9BT09 278 aa3.97□□□□□ -1.77
VRK1-205ENST00000555402 SRXN1Q9BYN0 137 aa3.97□□□□□ -1.77
VRK1-205ENST00000555402 PTGES2Q9H7Z7 377 aa3.97□□□□□ -1.77
VRK1-205ENST00000555402 MCCC2Q9HCC0 563 aa3.97□□□□□ -1.77
VRK1-205ENST00000555402 RABL2AQ9UBK7 228 aaPredicted RBP3.97□□□□□ -1.77
VRK1-205ENST00000555402 PIGLQ9Y2B2 252 aa3.97□□□□□ -1.77
VRK1-205ENST00000555402 FAM168BA1KXE4 195 aa3.96□□□□□ -1.78
VRK1-205ENST00000555402 HELTA6NFD8 242 aa3.96□□□□□ -1.78
VRK1-205ENST00000555402 TUBAL3A6NHL2 446 aa3.96□□□□□ -1.78
VRK1-205ENST00000555402 GOLGA8SH3BPF8 625 aa3.96□□□□□ -1.78
VRK1-205ENST00000555402 TNFSF11O14788 317 aa3.96□□□□□ -1.78
VRK1-205ENST00000555402 FCMRO60667 390 aa3.96□□□□□ -1.78
VRK1-205ENST00000555402 ECI2O75521 394 aa3.96□□□□□ -1.78
VRK1-205ENST00000555402 SERPINA3P01011 423 aa3.96□□□□□ -1.78
VRK1-205ENST00000555402 LGALS2P05162 132 aa3.96□□□□□ -1.78
VRK1-205ENST00000555402 COX5AP20674 150 aa3.96□□□□□ -1.78
VRK1-205ENST00000555402 HNRNPA3P51991 378 aaKnown RBP3.96□□□□□ -1.78
VRK1-205ENST00000555402 ARL6IP1Q15041 203 aa3.96□□□□□ -1.78
VRK1-205ENST00000555402 KIAA0040Q15053 153 aa3.96□□□□□ -1.78
VRK1-205ENST00000555402 CFAP221Q4G0U5 840 aa3.96□□□□□ -1.78
VRK1-205ENST00000555402 UTF1Q5T230 341 aa3.96□□□□□ -1.78
VRK1-205ENST00000555402 CCDC183Q5T5S1 534 aa3.96□□□□□ -1.78
VRK1-205ENST00000555402 FBXO16Q8IX29 292 aaPredicted RBP3.96□□□□□ -1.78
VRK1-205ENST00000555402 SKA3Q8IX90 412 aa3.96□□□□□ -1.78
VRK1-205ENST00000555402 UBE2J2Q8N2K1 259 aa3.96□□□□□ -1.78
VRK1-205ENST00000555402 OR2L13Q8N349 312 aa3.96□□□□□ -1.78
VRK1-205ENST00000555402 SVOPLQ8N434 492 aa3.96□□□□□ -1.78
VRK1-205ENST00000555402 OTUD6BQ8N6M0 293 aa3.96□□□□□ -1.78
VRK1-205ENST00000555402 OR10H4Q8NGA5 316 aa3.96□□□□□ -1.78
VRK1-205ENST00000555402 OR56B4Q8NH76 319 aa3.96□□□□□ -1.78
VRK1-205ENST00000555402 NEIL2Q969S2 332 aa3.96□□□□□ -1.78
VRK1-205ENST00000555402 C10orf35Q96D05 121 aa3.96□□□□□ -1.78
VRK1-205ENST00000555402 CNOT6LQ96LI5 555 aaKnown RBP3.96□□□□□ -1.78
VRK1-205ENST00000555402 PARD6BQ9BYG5 372 aa3.96□□□□□ -1.78
VRK1-205ENST00000555402 VCPKMTQ9H867 229 aa3.96□□□□□ -1.78
VRK1-205ENST00000555402 NHEJ1Q9H9Q4 299 aaPredicted RBP3.96□□□□□ -1.78
VRK1-205ENST00000555402 BFARQ9NZS9 450 aa3.96□□□□□ -1.78
VRK1-205ENST00000555402 KANK1Q14678 1352 aa3.96□□□□□ -1.78
VRK1-205ENST00000555402 FAM240BA0A1B0GVZ2 78 aa3.95□□□□□ -1.78
VRK1-205ENST00000555402 ARHGEF35A5YM69 484 aa3.95□□□□□ -1.78
VRK1-205ENST00000555402 BTBD17A6NE02 478 aa3.95□□□□□ -1.78
VRK1-205ENST00000555402 SNTNA6NMZ2 147 aa3.95□□□□□ -1.78
VRK1-205ENST00000555402 IDSB3KWA1 339 aa3.95□□□□□ -1.78
VRK1-205ENST00000555402 H0Y8G0 127 aa3.95□□□□□ -1.78
VRK1-205ENST00000555402 NBR2O15453 112 aa3.95□□□□□ -1.78
VRK1-205ENST00000555402 LYPLA1O75608 230 aaPredicted RBP3.95□□□□□ -1.78
VRK1-205ENST00000555402 SERF1AO75920 110 aa3.95□□□□□ -1.78
VRK1-205ENST00000555402 HTR1FP30939 366 aa3.95□□□□□ -1.78
VRK1-205ENST00000555402 CCR1P32246 355 aa3.95□□□□□ -1.78
VRK1-205ENST00000555402 MAP3K8P41279 467 aa3.95□□□□□ -1.78
VRK1-205ENST00000555402 HLCSP50747 726 aa3.95□□□□□ -1.78
VRK1-205ENST00000555402 DIO3P55073 304 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms