RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 NUP54Q7Z3B4 507 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 CCDC71Q8IV32 467 aaPredicted RBP9□□□□□ -0.97
PSEN1-213ENST00000555386 P3H2Q8IVL5 708 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 ENTHD1Q8IYW4 607 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 RHOXF1Q8NHV9 184 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 PAQR8Q8TEZ7 354 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 HGDQ93099 445 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 MYDGFQ969H8 173 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 TMCO6Q96DC7 493 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 YIPF6Q96EC8 236 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 FEVQ99581 238 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 FAM173AQ9BQD7 235 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 PRR14Q9BWN1 585 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 BTBD2Q9BX70 525 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 DEFB127Q9H1M4 99 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 PIGUQ9H490 435 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 ACOT13Q9NPJ3 140 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 TBCCD1Q9NVR7 557 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 CNIH4Q9P003 139 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 NPIPA1Q9UND3 350 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 TESMINQ9Y4I5 508 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 HEATR5AQ86XA9 2040 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 TMEM247A6NEH6 219 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 OR6C70A6NIJ9 312 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 TTC36A6NLP5 189 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 CLDN24A6NM45 220 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 CCNB2O95067 398 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 OXSR1O95747 527 aaPredicted RBP8.99□□□□□ -0.97
PSEN1-213ENST00000555386 IL33O95760 270 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 MT-ND2P03891 347 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 OPN1SWP03999 348 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 HPGDP15428 266 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 ZNF12P17014 697 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 ZNF24P17028 368 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 NAGAP17050 411 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 CD247P20963 164 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 EVI2BP34910 448 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 MAP3K8P41279 467 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 SERPINB10P48595 397 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 MAN2A2P49641 1150 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 ANXA11P50995 505 aaKnown RBP8.99□□□□□ -0.97
PSEN1-213ENST00000555386 PSMD4P55036 377 aaKnown RBP8.99□□□□□ -0.97
PSEN1-213ENST00000555386 CDH12P55289 794 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 PIGFQ07326 219 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 GPR68Q15743 365 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 TBCEQ15813 527 aaPredicted RBP8.99□□□□□ -0.97
PSEN1-213ENST00000555386 EXOC3L2Q2M3D2 409 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 RNFT1Q5M7Z0 435 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 ATAD3BQ5T9A4 648 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 MARCH3Q86UD3 253 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 P2RY8Q86VZ1 359 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 DND1Q8IYX4 353 aaKnown RBP8.99□□□□□ -0.97
PSEN1-213ENST00000555386 B4GALNT2Q8NHY0 566 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 FAM81AQ8TBF8 368 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 APH1BQ8WW43 257 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 FRMD6Q96NE9 622 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 ZNF607Q96SK3 696 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 STACQ99469 402 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 TBL1XR1Q9BZK7 514 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 PROK2Q9HC23 129 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 SH2D2AQ9NP31 389 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 DUSP22Q9NRW4 184 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 ACER3Q9NUN7 267 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 FKBP14Q9NWM8 211 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 PSORS1C1Q9UIG5 152 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 RNF6Q9Y252 685 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 MYO7BQ6PIF6 2116 aa8.99□□□□□ -0.97
PSEN1-213ENST00000555386 DIDO1Q9BTC0 2240 aaKnown RBP8.99□□□□□ -0.97
PSEN1-213ENST00000555386 SH3D21A4FU49 640 aa8.98□□□□□ -0.97
PSEN1-213ENST00000555386 DUXAA6NLW8 204 aa8.98□□□□□ -0.97
PSEN1-213ENST00000555386 CLCA1A8K7I4 914 aa8.98□□□□□ -0.97
PSEN1-213ENST00000555386 HMGN4O00479 90 aa8.98□□□□□ -0.97
PSEN1-213ENST00000555386 TRAPPC6AO75865 159 aa8.98□□□□□ -0.97
PSEN1-213ENST00000555386 GADD45GO95257 159 aa8.98□□□□□ -0.97
PSEN1-213ENST00000555386 CRYABP02511 175 aaKnown RBP8.98□□□□□ -0.97
PSEN1-213ENST00000555386 TFPTP0C1Z6 253 aa8.98□□□□□ -0.97
PSEN1-213ENST00000555386 NR2F1P10589 423 aa8.98□□□□□ -0.97
PSEN1-213ENST00000555386 CBLP22681 906 aa8.98□□□□□ -0.97
PSEN1-213ENST00000555386 MST1P26927 711 aa8.98□□□□□ -0.97
PSEN1-213ENST00000555386 EPHA2P29317 976 aa8.98□□□□□ -0.97
PSEN1-213ENST00000555386 PNLIPRP2P54317 469 aa8.98□□□□□ -0.97
PSEN1-213ENST00000555386 SMIM11AP58511 58 aa8.98□□□□□ -0.97
PSEN1-213ENST00000555386 AQP6Q13520 282 aa8.98□□□□□ -0.97
PSEN1-213ENST00000555386 GNA13Q14344 377 aa8.98□□□□□ -0.97
PSEN1-213ENST00000555386 SYPL1Q16563 259 aa8.98□□□□□ -0.97
PSEN1-213ENST00000555386 FLYWCH1Q4VC44 716 aa8.98□□□□□ -0.97
PSEN1-213ENST00000555386 DMRTA1Q5VZB9 504 aa8.98□□□□□ -0.97
PSEN1-213ENST00000555386 Q6ZNX1 250 aa8.98□□□□□ -0.97
PSEN1-213ENST00000555386 OR4C3Q8NH37 302 aa8.98□□□□□ -0.97
PSEN1-213ENST00000555386 MIPOL1Q8TD10 442 aa8.98□□□□□ -0.97
PSEN1-213ENST00000555386 PHF10Q8WUB8 498 aaKnown RBP8.98□□□□□ -0.97
PSEN1-213ENST00000555386 SLC38A5Q8WUX1 472 aa8.98□□□□□ -0.97
PSEN1-213ENST00000555386 S100ZQ8WXG8 99 aa8.98□□□□□ -0.97
PSEN1-213ENST00000555386 PROX1Q92786 737 aa8.98□□□□□ -0.97
PSEN1-213ENST00000555386 DHRS1Q96LJ7 313 aa8.98□□□□□ -0.97
PSEN1-213ENST00000555386 GNRHR2Q96P88 292 aa8.98□□□□□ -0.97
PSEN1-213ENST00000555386 SDF2Q99470 211 aa8.98□□□□□ -0.97
PSEN1-213ENST00000555386 TTTY12Q9BZ98 90 aa8.98□□□□□ -0.97
PSEN1-213ENST00000555386 EXO5Q9H790 373 aa8.98□□□□□ -0.97
PSEN1-213ENST00000555386 MKLN1Q9UL63 735 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms