RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 TAS2R16Q9NYV7 291 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 RCOR3Q9P2K3 495 aaPredicted RBP4.32□□□□□ -1.72
VRK1-203ENST00000555067 AK6Q9Y3D8 172 aaKnown RBP4.32□□□□□ -1.72
VRK1-203ENST00000555067 PEX16Q9Y5Y5 336 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 IGHV4-4A0A075B6R2 117 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 ERICH2A1L162 156 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 TUBAL3A6NHL2 446 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 OR6C65A6NJZ3 312 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 E9PQ18 207 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 HIP1O00291 1037 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 TRAFD1O14545 582 aaPredicted RBP4.31□□□□□ -1.72
VRK1-203ENST00000555067 ZNF254O75437 659 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 CABYRO75952 493 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 ATP5LO75964 103 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 YEATS4O95619 227 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 TMEM50AO95807 157 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 APOA1P02647 267 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 HOXB7P09629 217 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 ZNF853P0CG23 659 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 ZNF24P17028 368 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 EDNRAP25101 427 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 ATP5A1P25705 553 aaKnown RBP4.31□□□□□ -1.72
VRK1-203ENST00000555067 STOMP27105 288 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 LCN1P31025 176 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 EMDP50402 254 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 PEX3P56589 373 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 YWHAEP62258 255 aaKnown RBP4.31□□□□□ -1.72
VRK1-203ENST00000555067 RPS6P62753 249 aaKnown RBP4.31□□□□□ -1.72
VRK1-203ENST00000555067 PLOD1Q02809 727 aaPredicted RBP4.31□□□□□ -1.72
VRK1-203ENST00000555067 ZNF85Q03923 595 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 EMC2Q15006 297 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 TAB1Q15750 504 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 SLC15A2Q16348 729 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 KLHL38Q2WGJ6 581 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 C1orf220Q5T0J3 134 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 WDR25Q64LD2 544 aaPredicted RBP4.31□□□□□ -1.72
VRK1-203ENST00000555067 ERICH5Q6P6B1 374 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 SASS6Q6UVJ0 657 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 NIPA1Q7RTP0 329 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 CATSPERDQ86XM0 798 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 ERI1Q8IV48 349 aaKnown RBP4.31□□□□□ -1.72
VRK1-203ENST00000555067 MFSD6LQ8IWD5 586 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 CD302Q8IX05 232 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 DHRSXQ8N5I4 330 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 KIR3DL3Q8N743 410 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 FAM86B1Q8N7N1 296 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 OR4F6Q8NGB9 312 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 NDNFQ8TB73 568 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 DYRK2Q92630 601 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 BIRC7Q96CA5 298 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 ASB9Q96DX5 294 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 NUS1Q96E22 293 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 ZBED3Q96IU2 234 aaPredicted RBP4.31□□□□□ -1.72
VRK1-203ENST00000555067 SERAC1Q96JX3 654 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 C18orf12Q96KH6 178 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 GLIPR2Q9H4G4 154 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 NMUR1Q9HB89 426 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 LYARQ9NX58 379 aaKnown RBP4.31□□□□□ -1.72
VRK1-203ENST00000555067 KLK11Q9UBX7 282 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 SCML2Q9UQR0 700 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 PDE10AQ9Y233 779 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 OARD1Q9Y530 152 aa4.31□□□□□ -1.72
VRK1-203ENST00000555067 GRIN2DO15399 1336 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 AGRNO00468 2067 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 IGLV7-46A0A075B6I9 117 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 A0A1W2PR80 420 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 SERPINE3A8MV23 424 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 F5H6K3 240 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 RGS16O15492 202 aaPredicted RBP4.3□□□□□ -1.72
VRK1-203ENST00000555067 SH3BGRLO75368 114 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 IGFBP1P08833 259 aaPredicted RBP4.3□□□□□ -1.72
VRK1-203ENST00000555067 UMPSP11172 480 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 BCKDHAP12694 445 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 GATA1P15976 413 aaPredicted RBP4.3□□□□□ -1.72
VRK1-203ENST00000555067 POLR2EP19388 210 aaKnown RBP4.3□□□□□ -1.72
VRK1-203ENST00000555067 CD80P33681 288 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 QARSP47897 775 aaKnown RBP4.3□□□□□ -1.72
VRK1-203ENST00000555067 KLRC3Q07444 240 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 RCAN2Q14206 197 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 ZNF77Q15935 545 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 VPS26BQ4G0F5 336 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 CCDC122Q5T0U0 273 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 STAC2Q6ZMT1 411 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 ERO1BQ86YB8 467 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 FAM58AQ8N1B3 248 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 OR4D9Q8NGE8 314 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 OR4A15Q8NGL6 344 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 OR9G4Q8NGQ1 327 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 CD300LFQ8TDQ1 290 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 TBCKQ8TEA7 893 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 PAQR8Q8TEZ7 354 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 KIFAP3Q92845 792 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 NSMCE3Q96MG7 304 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 CNN2Q99439 309 aaKnown RBP4.3□□□□□ -1.72
VRK1-203ENST00000555067 P2RY13Q9BPV8 354 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 PAIP2Q9BPZ3 127 aaKnown RBP4.3□□□□□ -1.72
VRK1-203ENST00000555067 LLPHQ9BRT6 129 aaKnown RBP4.3□□□□□ -1.72
VRK1-203ENST00000555067 NIPSNAP3BQ9BS92 247 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 FGFBP2Q9BYJ0 223 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 SLITRK2Q9H156 845 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms