RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 CSPG4Q6UVK1 2322 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 ZNHIT1O43257 154 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 SEC14L5O43304 696 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 FMO6PO60774 539 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 CLDN14O95500 239 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 TFPIP10646 304 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 PNMTP11086 282 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 CALB2P22676 271 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 CTSSP25774 331 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 AQP1P29972 269 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 CEACAM8P31997 349 aaPredicted RBP9.53□□□□□ -0.88
TMEM260-206ENST00000555046 KDELR2P33947 212 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 ACAA2P42765 397 aaKnown RBP9.53□□□□□ -0.88
TMEM260-206ENST00000555046 RNF144AP50876 292 aaPredicted RBP9.53□□□□□ -0.88
TMEM260-206ENST00000555046 SLC7A2P52569 658 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 SUCLG1P53597 346 aaKnown RBP9.53□□□□□ -0.88
TMEM260-206ENST00000555046 NUP107P57740 925 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 RAC3P60763 192 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 LIPEQ05469 1076 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 SLC25A35Q3KQZ1 300 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 SAMD4BQ5PRF9 694 aaKnown RBP9.53□□□□□ -0.88
TMEM260-206ENST00000555046 C8orf82Q6P1X6 216 aaPredicted RBP9.53□□□□□ -0.88
TMEM260-206ENST00000555046 HMGN2P46Q86SG4 172 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 ADGRE4PQ86SQ3 457 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 MCEMP1Q8IX19 187 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 MICU2Q8IYU8 434 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 PGAM4Q8N0Y7 254 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 ARHGAP24Q8N264 748 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 SLC43A2Q8N370 569 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 FITM2Q8N6M3 262 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 LSMEM1Q8N8F7 131 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 ATP6V1C2Q8NEY4 427 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 OR52E4Q8NGH9 312 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 OR2V1Q8NHB1 315 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 POC1BQ8TC44 478 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 POP5Q969H6 163 aaKnown RBP9.53□□□□□ -0.88
TMEM260-206ENST00000555046 ZHX1-C8orf76Q96EF9 292 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 KCTD14Q9BQ13 255 aaPredicted RBP9.53□□□□□ -0.88
TMEM260-206ENST00000555046 ADAM19Q9H013 955 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 ALG2Q9H553 416 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 C12orf10Q9HB07 376 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 SLC24A3Q9HC58 644 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 KCNJ16Q9NPI9 418 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 ADPRHL2Q9NX46 363 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 CMTM6Q9NX76 183 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 ADA2Q9NZK5 511 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 TRAPPC4Q9Y296 219 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 FAM215AQ9Y5M1 114 aa9.53□□□□□ -0.88
TMEM260-206ENST00000555046 DNAJC13O75165 2243 aa9.52□□□□□ -0.88
TMEM260-206ENST00000555046 ZNF407Q9C0G0 2248 aa9.52□□□□□ -0.88
TMEM260-206ENST00000555046 TMED7-TICAM2A0A0A6YYA0 188 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 SHISA8B8ZZ34 492 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 AP3D1O14617 1153 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 DNPH1O43598 174 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 EIF1BO60739 113 aaKnown RBP9.52□□□□□ -0.89
TMEM260-206ENST00000555046 LGI1O95970 557 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 PLGP00747 810 aaPredicted RBP9.52□□□□□ -0.89
TMEM260-206ENST00000555046 GKN3PP0CG01 181 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 TACR3P29371 465 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 SFTPDP35247 375 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 PEX19P40855 299 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 KCNJ5P48544 419 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 CLDN20P56880 219 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 RGS8P57771 180 aaPredicted RBP9.52□□□□□ -0.89
TMEM260-206ENST00000555046 PON3Q15166 354 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 RNPS1Q15287 305 aaKnown RBP9.52□□□□□ -0.89
TMEM260-206ENST00000555046 SYT14P1Q58G82 188 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 DCST1Q5T197 706 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 ULK3Q6PHR2 472 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 C5orf46Q6UWT4 87 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 TMPPEQ6ZT21 453 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 TRPM8Q7Z2W7 1104 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 ADGRG3Q86Y34 549 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 C10orf111Q8N326 155 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 CADM2Q8N3J6 435 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 OR10D3Q8NH80 312 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 ITLN2Q8WWU7 325 aaPredicted RBP9.52□□□□□ -0.89
TMEM260-206ENST00000555046 SLC47A1Q96FL8 570 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 TACO1Q9BSH4 297 aaKnown RBP9.52□□□□□ -0.89
TMEM260-206ENST00000555046 SFXN3Q9BWM7 321 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 POTEKPQ9BYX7 375 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 TRIM8Q9BZR9 551 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 PIGMQ9H3S5 423 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 GP6Q9HCN6 339 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 FANCFQ9NPI8 374 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 CTPS2Q9NRF8 586 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 TMEM181Q9P2C4 612 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 ABCD2Q9UBJ2 740 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 TESQ9UGI8 421 aaKnown RBP9.52□□□□□ -0.89
TMEM260-206ENST00000555046 OSGIN1Q9UJX0 560 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 RNF6Q9Y252 685 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 TMED7Q9Y3B3 224 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 RTTNQ86VV8 2226 aa9.52□□□□□ -0.89
TMEM260-206ENST00000555046 A0A0J9YW62 118 aa9.51□□□□□ -0.89
TMEM260-206ENST00000555046 CCT8L1PA6NM43 557 aa9.51□□□□□ -0.89
TMEM260-206ENST00000555046 A8MVM7 634 aa9.51□□□□□ -0.89
TMEM260-206ENST00000555046 B2RBV5 119 aa9.51□□□□□ -0.89
TMEM260-206ENST00000555046 SULT2B1O00204 365 aa9.51□□□□□ -0.89
TMEM260-206ENST00000555046 TNFSF11O14788 317 aa9.51□□□□□ -0.89
TMEM260-206ENST00000555046 EFNA2O43921 213 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms