RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 SULT1C2O00338 296 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 FADS1O60427 444 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 SRPX2O60687 465 aaPredicted RBP6.46□□□□□ -1.38
SYNE2-216ENST00000555002 HTR3AP46098 478 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 IL13RA1P78552 427 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 HOXC5Q00444 222 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 MFSD12Q6NUT3 480 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 TSSK4Q6SA08 328 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 SDR9C7Q8NEX9 313 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 OR5D18Q8NGL1 313 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 CLEC4DQ8WXI8 215 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 FAM163AQ96GL9 167 aaPredicted RBP6.46□□□□□ -1.38
SYNE2-216ENST00000555002 BOD1Q96IK1 185 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 MACROD1Q9BQ69 325 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 SHARPINQ9H0F6 387 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 ANKRD10Q9NXR5 420 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 CKAP5Q14008 2032 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 ADAM23O75077 832 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 CRYBA1P05813 215 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 FOLR1P15328 257 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 IDUAP35475 653 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 TAS2R46P59540 309 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 NTHL1P78549 312 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 SERTAD2Q14140 314 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 MSS51Q4VC12 460 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 DESI1Q6ICB0 168 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 PAPD4Q6PIY7 484 aaKnown RBP6.46□□□□□ -1.38
SYNE2-216ENST00000555002 FAM213BQ8TBF2 198 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 SORBS1Q9BX66 1292 aaKnown RBP6.46□□□□□ -1.38
SYNE2-216ENST00000555002 SLC6A17Q9H1V8 727 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 OR51J1Q9H342 316 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 CLCF1Q9UBD9 225 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.46□□□□□ -1.38
SYNE2-216ENST00000555002 TARBP1Q13395 1621 aaKnown RBP6.46□□□□□ -1.38
SYNE2-216ENST00000555002 A0A0A6YYC8 382 aaPredicted RBP6.46□□□□□ -1.38
SYNE2-216ENST00000555002 I3L1I5 382 aaPredicted RBP6.46□□□□□ -1.38
SYNE2-216ENST00000555002 EEDO75530 441 aaKnown RBP6.46□□□□□ -1.38
SYNE2-216ENST00000555002 UBCP0CG48 685 aaKnown RBP6.46□□□□□ -1.38
SYNE2-216ENST00000555002 FUT1P19526 365 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 SRP14P37108 136 aaKnown RBP6.46□□□□□ -1.38
SYNE2-216ENST00000555002 MRPL19P49406 292 aaKnown RBP6.46□□□□□ -1.38
SYNE2-216ENST00000555002 CLDN17P56750 224 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 ZNF33AQ06730 810 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 DUSP7Q16829 419 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 ZNF678Q5SXM1 525 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 PRAMEF20Q5VT98 475 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 NDUFAF7Q7L592 441 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 BRI3BPQ8WY22 251 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 TMEM43Q9BTV4 400 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 MINDY3Q9H8M7 445 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 AQP7P3A6NL99 342 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 C4orf47A7E2U8 309 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 SLC6A8P48029 635 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 MTNR1AP48039 350 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 RPL26P61254 145 aaKnown RBP6.46□□□□□ -1.38
SYNE2-216ENST00000555002 TESK1Q15569 626 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 SLC16A14Q7RTX9 510 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 MFSD6LQ8IWD5 586 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 FAM58AQ8N1B3 248 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 ZADH2Q8N4Q0 377 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 TMEM217Q8N7C4 229 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 OR8J2Q8NGG1 315 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 UCN3Q969E3 161 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 PRRT1Q99946 306 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 INPP5KQ9BT40 448 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 GABRQQ9UN88 632 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 PPLO60437 1756 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 K7ERQ8 282 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 SUSD5O60279 629 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 HOXA10P31260 410 aaPredicted RBP6.45□□□□□ -1.38
SYNE2-216ENST00000555002 DIO3P55073 304 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 CYCSP99999 105 aaKnown RBP6.45□□□□□ -1.38
SYNE2-216ENST00000555002 GALNT2Q10471 571 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 RAB33AQ14088 237 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 CATSPERDQ86XM0 798 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 KDM8Q8N371 416 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 FOXRED1Q96CU9 486 aaPredicted RBP6.45□□□□□ -1.38
SYNE2-216ENST00000555002 KAZALD1Q96I82 304 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 QPCTLQ9NXS2 382 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 OR6C2Q9NZP2 312 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 GPR39O43194 453 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 B3GALNT1O75752 331 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 OLFM2O95897 454 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 MMP2P08253 660 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 TMPRSS11FQ6ZWK6 438 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 LRRC57Q8N9N7 239 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 ABHD11Q8NFV4 315 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 GIMAP1Q8WWP7 306 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 WNT7AO00755 349 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 FOXD2O60548 495 aaPredicted RBP6.45□□□□□ -1.38
SYNE2-216ENST00000555002 CT45A10P0DMU9 189 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 FCGR2AP12318 317 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 GLB1P16278 677 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 VASPP50552 380 aaPredicted RBP6.45□□□□□ -1.38
SYNE2-216ENST00000555002 ERV3-1Q14264 604 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 NANOGP8Q6NSW7 305 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 COX15Q7KZN9 410 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 WFDC8Q8IUA0 241 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 OR6T1Q8NGN1 323 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 GOT1L1Q8NHS2 421 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms