RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 ALOX12P18054 663 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 MYL12AP19105 171 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 GCGRP47871 477 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 NUDT6P53370 316 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 PRKAG1P54619 331 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 RAB8AP61006 207 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 VBP1P61758 197 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 PMP22Q01453 160 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 ZNF91Q05481 1191 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 FUT5Q11128 374 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 TSPAN31Q12999 210 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 MLLT11Q13015 90 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-216ENST00000554975 SLC27A4Q6P1M0 643 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 FBXO42Q6P3S6 717 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 MTFR2Q6P444 385 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 Q6ZPB1 254 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-216ENST00000554975 RASSF6Q6ZTQ3 369 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 COX15Q7KZN9 410 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 IGFN1Q86VF2 1251 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 CCDC116Q8IYX3 515 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 OR2L13Q8N349 312 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 SLC15A4Q8N697 577 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 CSNK1A1LQ8N752 337 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 CDRT4Q8N9R6 151 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 PROKR2Q8NFJ6 384 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 OR11G2Q8NGC1 345 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 OR9A2Q8NGT5 310 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 NDNFQ8TB73 568 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 SLC7A13Q8TCU3 470 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 OSTF1Q92882 214 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 ABTB1Q969K4 478 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-216ENST00000554975 TM4SF19Q96DZ7 209 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 STACQ99469 402 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 SPOCK3Q9BQ16 436 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 YIPF2Q9BWQ6 316 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 ENKD1Q9H0I2 346 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 SLC38A1Q9H2H9 487 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 DSN1Q9H410 356 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 DUSP22Q9NRW4 184 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 RHCGQ9UBD6 479 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 CRNNQ9UBG3 495 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-216ENST00000554975 DAPP1Q9UN19 280 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 TMEM5Q9Y2B1 443 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 EXOSC1Q9Y3B2 195 aaKnown RBP10.19□□□□□ -0.78
SHMT2-216ENST00000554975 WDR45Q9Y484 360 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 PCDHGB6Q9Y5F9 930 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 TTC36A6NLP5 189 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 WASHC1A8K0Z3 465 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 C4orf51C9J302 202 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 ZNHIT1O43257 154 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 PRODHO43272 600 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 MAN1A2O60476 641 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 FMO6PO60774 539 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 SLC19A2O60779 497 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 PTHP01270 115 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 DBIP07108 87 aaKnown RBP10.18□□□□□ -0.78
SHMT2-216ENST00000554975 GUSBP08236 651 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 SMIM10L1P0DMW3 83 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 DBTP11182 482 aaKnown RBP10.18□□□□□ -0.78
SHMT2-216ENST00000554975 CPMP14384 443 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 POU2F1P14859 743 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 PORP16435 677 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-216ENST00000554975 AGAP20933 346 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 FBLP22087 321 aaKnown RBP10.18□□□□□ -0.78
SHMT2-216ENST00000554975 FPR3P25089 353 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 C21orf33P30042 268 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-216ENST00000554975 LIPAP38571 399 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 FEN1P39748 380 aaKnown RBP10.18□□□□□ -0.78
SHMT2-216ENST00000554975 RGS6P49758 472 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 TNFSF10P50591 281 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 NCS1P62166 190 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 ARG2P78540 354 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 ZNF45Q02386 682 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 SEC23BQ15437 767 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 INAQ16352 499 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 DECR1Q16698 335 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 SYT16Q17RD7 645 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 ARHGAP11BQ3KRB8 267 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 MINDY4Q4G0A6 757 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 CYP27C1Q4G0S4 372 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 ARMC4Q5T2S8 1044 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 C18orf63Q68DL7 685 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 FAAH2Q6GMR7 532 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 PODNL1Q6PEZ8 512 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 ZNF730Q6ZMV8 503 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 MEX3BQ6ZN04 569 aaKnown RBP10.18□□□□□ -0.78
SHMT2-216ENST00000554975 DCDC5Q6ZRR9 648 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 LACC1Q8IV20 430 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 PRSS58Q8IYP2 241 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 AMER3Q8N944 861 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 MORN4Q8NDC4 146 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 OR52P1PQ8NH57 321 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 ACOT11Q8WXI4 607 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-216ENST00000554975 PSMF1Q92530 271 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 DIO2Q92813 273 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 SMIM10Q96HG1 83 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 C10orf90Q96M02 699 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 ZNF285Q96NJ3 590 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 OR2A5Q96R48 311 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 LMF1Q96S06 567 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms