RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 ARHGAP11AQ6P4F7 1023 aa3.15□□□□□ -1.91
SEC23A-207ENST00000554615 SLC16A9Q7RTY1 509 aa3.15□□□□□ -1.91
SEC23A-207ENST00000554615 TMCO2Q7Z6W1 182 aaPredicted RBP3.15□□□□□ -1.91
SEC23A-207ENST00000554615 PARGQ86W56 976 aa3.15□□□□□ -1.91
SEC23A-207ENST00000554615 LHFPL1Q86WI0 220 aa3.15□□□□□ -1.91
SEC23A-207ENST00000554615 RAB43Q86YS6 212 aa3.15□□□□□ -1.91
SEC23A-207ENST00000554615 LRRC25Q8N386 305 aaPredicted RBP3.15□□□□□ -1.91
SEC23A-207ENST00000554615 CLIP4Q8N3C7 705 aa3.15□□□□□ -1.91
SEC23A-207ENST00000554615 TTC16Q8NEE8 873 aa3.15□□□□□ -1.91
SEC23A-207ENST00000554615 OR2T4Q8NH00 348 aa3.15□□□□□ -1.91
SEC23A-207ENST00000554615 STK35Q8TDR2 534 aa3.15□□□□□ -1.91
SEC23A-207ENST00000554615 GPX8Q8TED1 209 aa3.15□□□□□ -1.91
SEC23A-207ENST00000554615 THEM6Q8WUY1 208 aa3.15□□□□□ -1.91
SEC23A-207ENST00000554615 ZNRF4Q8WWF5 429 aa3.15□□□□□ -1.91
SEC23A-207ENST00000554615 THAP4Q8WY91 577 aa3.15□□□□□ -1.91
SEC23A-207ENST00000554615 KAT2AQ92830 837 aa3.15□□□□□ -1.91
SEC23A-207ENST00000554615 PELI1Q96FA3 418 aa3.15□□□□□ -1.91
SEC23A-207ENST00000554615 RBP7Q96R05 134 aa3.15□□□□□ -1.91
SEC23A-207ENST00000554615 MYOCQ99972 504 aa3.15□□□□□ -1.91
SEC23A-207ENST00000554615 LBHD1Q9BQE6 289 aaPredicted RBP3.15□□□□□ -1.91
SEC23A-207ENST00000554615 HCAR1Q9BXC0 346 aa3.15□□□□□ -1.91
SEC23A-207ENST00000554615 ENKD1Q9H0I2 346 aa3.15□□□□□ -1.91
SEC23A-207ENST00000554615 ZDHHC6Q9H6R6 413 aa3.15□□□□□ -1.91
SEC23A-207ENST00000554615 CTPS2Q9NRF8 586 aa3.15□□□□□ -1.91
SEC23A-207ENST00000554615 AASSQ9UDR5 926 aa3.15□□□□□ -1.91
SEC23A-207ENST00000554615 MMACHCQ9Y4U1 282 aa3.15□□□□□ -1.91
SEC23A-207ENST00000554615 OR14I1A6ND48 311 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 VSTM2BA6NLU5 285 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 SNTNA6NMZ2 147 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 OR4C45A6NMZ5 311 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 RFXAPO00287 272 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 BTN3A3O00478 584 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 PHYHO14832 338 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 LYRM1O43325 122 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 CRCPO75575 148 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 GLCEO94923 617 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 GLSO94925 669 aaPredicted RBP3.14□□□□□ -1.91
SEC23A-207ENST00000554615 NSA2O95478 260 aaKnown RBP3.14□□□□□ -1.91
SEC23A-207ENST00000554615 GIMD1P0DJR0 217 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 CD79AP11912 226 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 XPAP23025 273 aaPredicted RBP3.14□□□□□ -1.91
SEC23A-207ENST00000554615 PPP2R1BP30154 601 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 GJA4P35212 333 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 CHI3L1P36222 383 aaPredicted RBP3.14□□□□□ -1.91
SEC23A-207ENST00000554615 SOX3P41225 446 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 LSM11P83369 360 aaKnown RBP eCLIP3.14□□□□□ -1.91
SEC23A-207ENST00000554615 TP53BP2Q13625 1128 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 CST6Q15828 149 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 DUSP5Q16690 384 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 FAM214AQ32MH5 1076 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 CYP27C1Q4G0S4 372 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 LY6G6FQ5SQ64 297 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 SLC22A10Q63ZE4 541 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 THSD4Q6ZMP0 1018 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 C17orf64Q86WR6 236 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 CATSPERDQ86XM0 798 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 KMT5CQ86Y97 462 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 NKAIN4Q8IVV8 208 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 OR6V1Q8N148 313 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 FADS6Q8N9I5 356 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 AVL9Q8NBF6 648 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 PLPP5Q8NEB5 264 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 OR2T33Q8NG76 320 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 OR11H4Q8NGC9 324 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 ZNF721Q8TF20 911 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 SLC22A18Q96BI1 424 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 PEX11GQ96HA9 241 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 FOPNLQ96NB1 174 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 OR1F2PQ96R84 312 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 ABHD1Q96SE0 405 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 SYT3Q9BQG1 590 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 ACAT2Q9BWD1 397 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 RANBP3Q9H6Z4 567 aaPredicted RBP3.14□□□□□ -1.91
SEC23A-207ENST00000554615 SCPEP1Q9HB40 452 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 PNRC2Q9NPJ4 139 aaKnown RBP3.14□□□□□ -1.91
SEC23A-207ENST00000554615 SACM1LQ9NTJ5 587 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 C2orf42Q9NWW7 574 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 RCC2Q9P258 522 aaKnown RBP3.14□□□□□ -1.91
SEC23A-207ENST00000554615 FBXL2Q9UKC9 423 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 SSR3Q9UNL2 185 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 DNAH12Q6ZR08 3092 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 KIR2DS5A0A0G2JLQ3 304 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 A0A0G2JNG1 304 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 A0A1W2PQL4 384 aaPredicted RBP3.14□□□□□ -1.91
SEC23A-207ENST00000554615 PRSS38A1L453 326 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 KRT87PA6NCN2 255 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 DHRS7CA6NNS2 312 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 KIR2DS3K7RE56 304 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 CTSVO60911 334 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 GMNNO75496 209 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 ECDO95905 644 aaPredicted RBP3.14□□□□□ -1.91
SEC23A-207ENST00000554615 SERPINA3P01011 423 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 HMGN2P05204 90 aaKnown RBP3.14□□□□□ -1.91
SEC23A-207ENST00000554615 BCHEP06276 602 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 CKMP06732 381 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 HOXD4P09016 255 aaPredicted RBP3.14□□□□□ -1.91
SEC23A-207ENST00000554615 ADRA2CP18825 462 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 DEFA1P59665 94 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 DEFA3P59666 94 aa3.14□□□□□ -1.91
SEC23A-207ENST00000554615 STXBP1P61764 594 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms