RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 ZNHIT3Q15649 155 aaPredicted RBP5.75□□□□□ -1.49
SCFD1-212ENST00000554486 ZNF630Q2M218 657 aaPredicted RBP5.75□□□□□ -1.49
SCFD1-212ENST00000554486 DEFB109BQ30KR1 87 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 DCST2Q5T1A1 773 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 ATAD3BQ5T9A4 648 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 AP1ARQ63HQ0 302 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 REEP3Q6NUK4 255 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 JMJD6Q6NYC1 403 aaPredicted RBP5.75□□□□□ -1.49
SCFD1-212ENST00000554486 ERICH5Q6P6B1 374 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 INO80CQ6PI98 192 aaPredicted RBP5.75□□□□□ -1.49
SCFD1-212ENST00000554486 FRRS1Q6ZNA5 592 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 C16orf62Q7Z3J2 963 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 KCTD20Q7Z5Y7 419 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 MRGPRGQ86SM5 289 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 GALNT10Q86SR1 603 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 RPS19BP1Q86WX3 136 aaKnown RBP5.75□□□□□ -1.49
SCFD1-212ENST00000554486 SLC34A3Q8N130 599 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 OR2C3Q8N628 320 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 SIRT6Q8N6T7 355 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 BCORP1Q8N888 145 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 COX18Q8N8Q8 333 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 C11orf65Q8NCR3 313 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 TMBIM1Q969X1 311 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 SPSB4Q96A44 273 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 MCUR1Q96AQ8 359 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 OMA1Q96E52 524 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 TRNT1Q96Q11 434 aaKnown RBP5.75□□□□□ -1.49
SCFD1-212ENST00000554486 RASL10BQ96S79 203 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 KCTD14Q9BQ13 255 aaPredicted RBP5.75□□□□□ -1.49
SCFD1-212ENST00000554486 PTDSS2Q9BVG9 487 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 ZNF350Q9GZX5 532 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 LHPPQ9H008 270 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 PCDHAC1Q9H158 963 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 ING2Q9H160 280 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 MMADHCQ9H3L0 296 aaPredicted RBP5.75□□□□□ -1.49
SCFD1-212ENST00000554486 CDCP1Q9H5V8 836 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 CPNE5Q9HCH3 593 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 Q9N2J8 555 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 EXD2Q9NVH0 621 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 THUMPD1Q9NXG2 353 aaKnown RBP5.75□□□□□ -1.49
SCFD1-212ENST00000554486 LIPT1Q9Y234 373 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 OR10H1Q9Y4A9 318 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 PCDHGB3Q9Y5G1 929 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 HEATR5AQ86XA9 2040 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 TNRC6AQ8NDV7 1962 aaKnown RBP5.75□□□□□ -1.49
SCFD1-212ENST00000554486 DSPPQ9NZW4 1301 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 ATMQ13315 3056 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 NPIPA5A0A0B4J1W7 369 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 A6NL46 340 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 NPIPA7E9PJI5 369 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 CXCR6O00574 342 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 ARPC2O15144 300 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 KIAA0513O60268 411 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 STX11O75558 287 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 REM1O75628 298 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 CEACAM4O75871 244 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 OR6B1O95007 311 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 GUSBP08236 651 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 NPIPA8P0DM63 369 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 GGT1P19440 569 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 BTF3P20290 206 aaKnown RBP5.74□□□□□ -1.49
SCFD1-212ENST00000554486 ATP6V1B2P21281 511 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 RPS4Y1P22090 263 aaKnown RBP5.74□□□□□ -1.49
SCFD1-212ENST00000554486 ITGA3P26006 1051 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 AQP1P29972 269 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 KDELR2P33947 212 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 SOX3P41225 446 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 CCL11P51671 97 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 AP2B1P63010 937 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 PLCXD2Q0VAA5 305 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 BNIP2Q12982 314 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 VEZF1Q14119 521 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 MAPK14Q16539 360 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 DECR1Q16698 335 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 ZNF791Q3KP31 576 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-212ENST00000554486 GPAT3Q53EU6 434 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 FAM209BQ5JX69 171 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 ACER2Q5QJU3 275 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 PRAMEF8Q5VWM4 474 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 PRAMEF7Q5VXH5 474 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 TYW3Q6IPR3 259 aaKnown RBP5.74□□□□□ -1.49
SCFD1-212ENST00000554486 VWA1Q6PCB0 445 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 LRRC74BQ6ZQY2 392 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 CCDC80Q76M96 950 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 ZNF771Q7L3S4 317 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-212ENST00000554486 APLFQ8IW19 511 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-212ENST00000554486 SLC30A8Q8IWU4 369 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 BEST3Q8N1M1 668 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 GALNT16Q8N428 558 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 SLC5A8Q8N695 610 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 METTL25Q8N6Q8 603 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 CLEC1AQ8NC01 280 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 FIG4Q92562 907 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 EFHD2Q96C19 240 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-212ENST00000554486 CCDC124Q96CT7 223 aaKnown RBP5.74□□□□□ -1.49
SCFD1-212ENST00000554486 ZG16BQ96DA0 208 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 Q96MF0 132 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 TREX2Q9BQ50 279 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-212ENST00000554486 BCL2L10Q9HD36 194 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 POLE3Q9NRF9 147 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 925.6 ms