RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 ASF1AQ9Y294 204 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 PTPRDP23468 1912 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 A8MWP6 167 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 GABARAPH6UMI1 98 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 PGRMC2O15173 223 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 DLEU1O43261 78 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 OR10H3O60404 316 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 NDUFS3O75489 264 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 CRTAPO75718 401 aaPredicted RBP8.85□□□□□ -0.99
SIX4-202ENST00000554079 PTBP3O95758 552 aaKnown RBP8.85□□□□□ -0.99
SIX4-202ENST00000554079 CD8AP01732 235 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 IFNW1P05000 195 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 ATP1B1P05026 303 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 ASGR2P07307 311 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 SFTPBP07988 381 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 GJB1P08034 283 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 ITGA5P08648 1049 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 SFTA3P0C7M3 94 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 LAMP1P11279 417 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 COX7A2P14406 83 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 AMD1P17707 334 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 MAS1LP35410 378 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 GNALP38405 381 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 GDF5P43026 501 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 DGKGP49619 791 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 CDKN1CP49918 316 aaPredicted RBP8.85□□□□□ -0.99
SIX4-202ENST00000554079 EPHB3P54753 998 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 PCBP3P57721 371 aaKnown RBP8.85□□□□□ -0.99
SIX4-202ENST00000554079 MRPS11P82912 194 aaKnown RBP8.85□□□□□ -0.99
SIX4-202ENST00000554079 BDH1Q02338 343 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 PLA2G7Q13093 441 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 RNASE10Q5GAN6 216 aaKnown RBP8.85□□□□□ -0.99
SIX4-202ENST00000554079 TMEM31Q5JXX7 168 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 LY6G6FQ5SQ64 297 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 GLT8D1Q68CQ7 371 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 ADNP2Q6IQ32 1131 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 FIGNL1Q6PIW4 674 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 GPC2Q8N158 579 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 C19orf47Q8N9M1 422 aaKnown RBP8.85□□□□□ -0.99
SIX4-202ENST00000554079 PNLDC1Q8NA58 520 aaKnown RBP8.85□□□□□ -0.99
SIX4-202ENST00000554079 TTC16Q8NEE8 873 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 WFIKKN2Q8TEU8 576 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 APOLD1Q96LR9 279 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 AMDHD1Q96NU7 426 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 PKP4Q99569 1192 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 P2RY12Q9H244 342 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 NCOR1P1Q9H4R4 102 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 ASCL3Q9NQ33 180 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 ABRACLQ9P1F3 81 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 CACFD1Q9UGQ2 172 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 GAB2Q9UQC2 676 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 GOLT1BQ9Y3E0 138 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 TIMM10BQ9Y5J6 103 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 IGKV6-21A0A0C4DH24 114 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 FAM157AC9JC47 383 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 RTCAO00442 366 aaKnown RBP8.85□□□□□ -0.99
SIX4-202ENST00000554079 AK1P00568 194 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 SLC25A4P12235 298 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 EPB42P16452 691 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 ZNF25P17030 456 aaPredicted RBP8.85□□□□□ -0.99
SIX4-202ENST00000554079 TMEM11P17152 192 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 NDUFS1P28331 727 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 CCND3P30281 292 aaPredicted RBP8.85□□□□□ -0.99
SIX4-202ENST00000554079 GIPRP48546 466 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 MRPS10P82664 201 aaKnown RBP8.85□□□□□ -0.99
SIX4-202ENST00000554079 INSM1Q01101 510 aaPredicted RBP8.85□□□□□ -0.99
SIX4-202ENST00000554079 GAGE1Q13065 139 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 MAPK14Q16539 360 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 NKPD1Q17RQ9 610 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 KRBOX4Q5JUW0 171 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 DCST1Q5T197 706 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 NOXRED1Q6NXP6 359 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 UBE2R2Q712K3 238 aaPredicted RBP8.85□□□□□ -0.99
SIX4-202ENST00000554079 GAREM2Q75VX8 874 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 LINGO2Q7L985 606 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 MRGPREQ86SM8 312 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 GPR137CQ8N3F9 429 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 GTPBP8Q8N3Z3 284 aaPredicted RBP8.85□□□□□ -0.99
SIX4-202ENST00000554079 EID2Q8N6I1 236 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 ARRDC2Q8TBH0 407 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 ISOC2Q96AB3 205 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 ECHDC3Q96DC8 303 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 EBPLQ9BY08 206 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 SMG9Q9H0W8 520 aaKnown RBP8.85□□□□□ -0.99
SIX4-202ENST00000554079 CXCL16Q9H2A7 254 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 RDH14Q9HBH5 336 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 PRDM7Q9NQW5 492 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 MAN2C1Q9NTJ4 1040 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 NLE1Q9NVX2 485 aaPredicted RBP8.85□□□□□ -0.99
SIX4-202ENST00000554079 FBXL4Q9UKA2 621 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 EXOGQ9Y2C4 368 aaKnown RBP8.85□□□□□ -0.99
SIX4-202ENST00000554079 MRPS18CQ9Y3D5 142 aaKnown RBP8.85□□□□□ -0.99
SIX4-202ENST00000554079 ZNF337Q9Y3M9 751 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 NPFFR2Q9Y5X5 522 aa8.85□□□□□ -0.99
SIX4-202ENST00000554079 KCNE1BA0A087WTH5 132 aa8.84□□□□□ -0.99
SIX4-202ENST00000554079 ANKRD61A6NGH8 418 aa8.84□□□□□ -0.99
SIX4-202ENST00000554079 M0QZ92 97 aa8.84□□□□□ -0.99
SIX4-202ENST00000554079 CLDN5O00501 218 aa8.84□□□□□ -0.99
SIX4-202ENST00000554079 GUCA1CO95843 209 aa8.84□□□□□ -0.99
SIX4-202ENST00000554079 F10P00742 488 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms