RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 HYAL1Q12794 435 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 C1orf94Q6P1W5 598 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 RD3Q7Z3Z2 195 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 TMPRSS9Q7Z410 1059 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 KLHL36Q8N4N3 616 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 NUP43Q8NFH3 380 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 BEST4Q8NFU0 473 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 FLVCR1-AS1Q8TAF5 88 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 TSACCQ96A04 125 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-207ENST00000553837 C10orf90Q96M02 699 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 PRRC1Q96M27 445 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 OR2M4Q96R27 311 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 GABRG3Q99928 467 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 NKX2-4Q9H2Z4 354 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 PTGFRNQ9P2B2 879 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 A0A0G2JPF8 293 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 LINC00587B1AMM8 73 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 HNRNPCL3B7ZW38 293 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 G3V3Q6 166 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 L7N2F9 121 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 EMC8O43402 210 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 RGS9O75916 674 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-207ENST00000553837 EGFP01133 1207 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 FGF2P09038 288 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 ZNF888P0CJ79 500 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-207ENST00000553837 HNRNPCL4P0DMR1 293 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 CMPK1P30085 196 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 NTSR1P30989 418 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 TRHRP34981 398 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-207ENST00000553837 CD79BP40259 229 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 RPL35P42766 123 aaKnown RBP11.33□□□□□ -0.6
SHMT2-207ENST00000553837 RAB13P51153 203 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 ZP1P60852 638 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 PITPNAQ00169 270 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 CEBPEQ15744 281 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 ZSWIM7Q19AV6 140 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 TCTE1Q5JU00 501 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 SLC22A10Q63ZE4 541 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 FBXO42Q6P3S6 717 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 FAM111BQ6SJ93 734 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 ENPP7Q6UWV6 458 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 B3GLCTQ6Y288 498 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 SIAH3Q8IW03 269 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 ZNF687Q8N1G0 1237 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 DOK4Q8TEW6 326 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 LCN9Q8WX39 176 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 C8orf33Q9H7E9 229 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-207ENST00000553837 SEMA4GQ9NTN9 838 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 PPP1R14DQ9NXH3 145 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 ENTPD4Q9Y227 616 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 SLC9A8Q9Y2E8 581 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 KCNK7Q9Y2U2 307 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 AIPO00170 330 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 PDCD5O14737 125 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 P2RX6O15547 441 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 THY1P04216 161 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 NMBP08949 121 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 GSTM3P21266 225 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 SELENOPP49908 381 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 RNF144AP50876 292 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-207ENST00000553837 SHC2P98077 582 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 DHODHQ02127 395 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 MLLT1Q03111 559 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-207ENST00000553837 DLX2Q07687 328 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-207ENST00000553837 INSL4Q14641 139 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 ZNF311Q5JNZ3 666 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 ENTPD8Q5MY95 495 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 NUDT18Q6ZVK8 323 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 SHFQ7M4L6 423 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 HSD17B13Q7Z5P4 300 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-207ENST00000553837 SLITRK4Q8IW52 837 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 BVESQ8NE79 360 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 OR7G2Q8NG99 324 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 OR56A1Q8NGH5 318 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 RFKQ969G6 155 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 SLC35A4Q96G79 324 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 CXorf58Q96LI9 332 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 MNTQ99583 582 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 SPATA5L1Q9BVQ7 753 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 PINK1Q9BXM7 581 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 OR6C2Q9NZP2 312 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 PCOLCE2Q9UKZ9 415 aa11.33□□□□□ -0.6
SHMT2-207ENST00000553837 SCN2AQ99250 2005 aa11.32□□□□□ -0.6
SHMT2-207ENST00000553837 CPSF4LA6NMK7 179 aaKnown RBP11.32□□□□□ -0.6
SHMT2-207ENST00000553837 KDM4EB2RXH2 506 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-207ENST00000553837 LGALS8O00214 317 aa11.32□□□□□ -0.6
SHMT2-207ENST00000553837 CTSVO60911 334 aa11.32□□□□□ -0.6
SHMT2-207ENST00000553837 FZD7O75084 574 aa11.32□□□□□ -0.6
SHMT2-207ENST00000553837 KLF8O95600 359 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-207ENST00000553837 CCR6P51684 374 aa11.32□□□□□ -0.6
SHMT2-207ENST00000553837 PDX1P52945 283 aa11.32□□□□□ -0.6
SHMT2-207ENST00000553837 RELQ04864 619 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-207ENST00000553837 ZNF155Q12901 538 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-207ENST00000553837 GPR68Q15743 365 aa11.32□□□□□ -0.6
SHMT2-207ENST00000553837 ZNF124Q15973 351 aa11.32□□□□□ -0.6
SHMT2-207ENST00000553837 OR4N5Q8IXE1 308 aa11.32□□□□□ -0.6
SHMT2-207ENST00000553837 POGLUT1Q8NBL1 392 aa11.32□□□□□ -0.6
SHMT2-207ENST00000553837 SLC16A11Q8NCK7 471 aa11.32□□□□□ -0.6
SHMT2-207ENST00000553837 OR52N1Q8NH53 320 aa11.32□□□□□ -0.6
SHMT2-207ENST00000553837 BMFQ96LC9 184 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms