RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 KLHL13Q9P2N7 655 aa9.11□□□□□ -0.95
HNRNPC-208ENST00000553753 PRDM4Q9UKN5 801 aa9.11□□□□□ -0.95
HNRNPC-208ENST00000553753 CORO2BQ9UQ03 480 aa9.11□□□□□ -0.95
HNRNPC-208ENST00000553753 ZNF443Q9Y2A4 671 aaPredicted RBP9.11□□□□□ -0.95
HNRNPC-208ENST00000553753 IFT52Q9Y366 437 aa9.11□□□□□ -0.95
HNRNPC-208ENST00000553753 MAP1AP78559 2803 aaPredicted RBP9.1□□□□□ -0.95
HNRNPC-208ENST00000553753 IGHV3-15A0A0B4J1V0 119 aa9.1□□□□□ -0.95
HNRNPC-208ENST00000553753 CASKO14936 926 aa9.1□□□□□ -0.95
HNRNPC-208ENST00000553753 ANGPT2O15123 496 aa9.1□□□□□ -0.95
HNRNPC-208ENST00000553753 YES1P07947 543 aa9.1□□□□□ -0.95
HNRNPC-208ENST00000553753 GKN3PP0CG01 181 aa9.1□□□□□ -0.95
HNRNPC-208ENST00000553753 ETS2P15036 469 aa9.1□□□□□ -0.95
HNRNPC-208ENST00000553753 TACR3P29371 465 aa9.1□□□□□ -0.95
HNRNPC-208ENST00000553753 CLK1P49759 484 aaKnown RBP9.1□□□□□ -0.95
HNRNPC-208ENST00000553753 POLR2HP52434 150 aaKnown RBP9.1□□□□□ -0.95
HNRNPC-208ENST00000553753 MAP2K6P52564 334 aa9.1□□□□□ -0.95
HNRNPC-208ENST00000553753 ZNF311Q5JNZ3 666 aa9.1□□□□□ -0.95
HNRNPC-208ENST00000553753 FBXW10Q5XX13 1052 aa9.1□□□□□ -0.95
HNRNPC-208ENST00000553753 BEND4Q6ZU67 534 aa9.1□□□□□ -0.95
HNRNPC-208ENST00000553753 TUSC5Q8IXB3 177 aa9.1□□□□□ -0.95
HNRNPC-208ENST00000553753 C10orf111Q8N326 155 aa9.1□□□□□ -0.95
HNRNPC-208ENST00000553753 CLIP4Q8N3C7 705 aa9.1□□□□□ -0.95
HNRNPC-208ENST00000553753 DPP10Q8N608 796 aa9.1□□□□□ -0.95
HNRNPC-208ENST00000553753 BBS10Q8TAM1 723 aa9.1□□□□□ -0.95
HNRNPC-208ENST00000553753 ARL5BQ96KC2 179 aa9.1□□□□□ -0.95
HNRNPC-208ENST00000553753 IKZF5Q9H5V7 419 aa9.1□□□□□ -0.95
HNRNPC-208ENST00000553753 C12orf49Q9H741 205 aa9.1□□□□□ -0.95
HNRNPC-208ENST00000553753 MRGBPQ9NV56 204 aa9.1□□□□□ -0.95
HNRNPC-208ENST00000553753 KLHL9Q9P2J3 617 aa9.1□□□□□ -0.95
HNRNPC-208ENST00000553753 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.1□□□□□ -0.95
HNRNPC-208ENST00000553753 OSGIN1Q9UJX0 560 aa9.1□□□□□ -0.95
HNRNPC-208ENST00000553753 HDGFL3Q9Y3E1 203 aa9.1□□□□□ -0.95
HNRNPC-208ENST00000553753 CHST2Q9Y4C5 530 aa9.1□□□□□ -0.95
HNRNPC-208ENST00000553753 VPS13CQ709C8 3753 aa9.1□□□□□ -0.95
HNRNPC-208ENST00000553753 TMED7-TICAM2A0A0A6YYA0 188 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 SMAD9O15198 467 aaKnown RBP9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 ZNF208O43345 1280 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 ATP8B1O43520 1251 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 CYTIPO60759 359 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 GOSR1O95249 250 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 ARAFP10398 606 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 CCNA2P20248 432 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 ACAA2P42765 397 aaKnown RBP9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 ARFIP2P53365 341 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 COPZ1P61923 177 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 CDK6Q00534 326 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 RASGEF1BQ0VAM2 473 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 RUNDC3AQ59EK9 446 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 GCNT6Q5T4J0 391 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 REEP3Q6NUK4 255 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 ZNF550Q7Z398 422 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 DHDDSQ86SQ9 333 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 MTDHQ86UE4 582 aaKnown RBP9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 CDH24Q86UP0 819 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 RETREG3Q86VR2 466 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 NFKBIDQ8NI38 313 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 DDIT4LQ96D03 193 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 WFIKKN1Q96NZ8 548 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 PSD2Q9BQI7 771 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 MED18Q9BUE0 208 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 SPATA9Q9BWV2 254 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 KLHL4Q9C0H6 718 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 OR11A1Q9GZK7 315 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 ADAM19Q9H013 955 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 CCDC134Q9H6E4 229 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 TMEM38AQ9H6F2 299 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 BCO1Q9HAY6 547 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 FANCFQ9NPI8 374 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 KLHL28Q9NXS3 571 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 TMED7Q9Y3B3 224 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 FREM1Q5H8C1 2179 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 PMS2P2O95744 297 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 FESP07332 822 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 SLC6A2P23975 617 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 CCKARP32238 428 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 SF3A3Q12874 501 aaKnown RBP eCLIP9.09□□□□□ -0.958e-8■■■□□ 16.9
HNRNPC-208ENST00000553753 ADRM1Q16186 407 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 WBP2NLQ6ICG8 309 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 CGB2Q6NT52 195 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 STAC2Q6ZMT1 411 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 NUFIP2Q7Z417 695 aaKnown RBP9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 CDC20BQ86Y33 519 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 KRT73Q86Y46 540 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 NRGNQ92686 78 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 ZHX1-C8orf76Q96EF9 292 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 DNAJA3Q96EY1 480 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 ANKRD27Q96NW4 1050 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 CGREF1Q99674 301 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 CPPED1Q9BRF8 314 aaPredicted RBP9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 TACO1Q9BSH4 297 aaKnown RBP9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 ZNF226Q9NYT6 803 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 TMEM181Q9P2C4 612 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 ING1Q9UK53 422 aaPredicted RBP9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 TRAPPC4Q9Y296 219 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 TESMINQ9Y4I5 508 aa9.09□□□□□ -0.95
HNRNPC-208ENST00000553753 TMEM72A0PK05 275 aa9.08□□□□□ -0.96
HNRNPC-208ENST00000553753 DNPH1O43598 174 aa9.08□□□□□ -0.96
HNRNPC-208ENST00000553753 PRG2P13727 222 aa9.08□□□□□ -0.96
HNRNPC-208ENST00000553753 KLK2P20151 261 aa9.08□□□□□ -0.96
HNRNPC-208ENST00000553753 CXCR1P25024 350 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms