RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 Q7L0L9 218 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 TRPM8Q7Z2W7 1104 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 NUFIP2Q7Z417 695 aaKnown RBP3.21□□□□□ -1.9
TDP1-207ENST00000553617 CENPSQ8N2Z9 138 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 LIX1Q8N485 282 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 ZNF248Q8NDW4 579 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 NUP37Q8NFH4 326 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 OR4A15Q8NGL6 344 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 KCNG3Q8TAE7 436 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 PNPT1Q8TCS8 783 aaKnown RBP3.21□□□□□ -1.9
TDP1-207ENST00000553617 SSC4DQ8WTU2 575 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 DYDC1Q8WWB3 177 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 RAD51AP1Q96B01 352 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 UPRTQ96BW1 309 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 BIRC7Q96CA5 298 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 ATXN7L3BQ96GX2 97 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 CCNL2Q96S94 520 aaPredicted RBP3.21□□□□□ -1.9
TDP1-207ENST00000553617 RIT2Q99578 217 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 CGREF1Q99674 301 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 CHRDL1Q9BU40 450 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 RPP25Q9BUL9 199 aaKnown RBP3.21□□□□□ -1.9
TDP1-207ENST00000553617 ROPN1BQ9BZX4 212 aaPredicted RBP3.21□□□□□ -1.9
TDP1-207ENST00000553617 TRIM4Q9C037 500 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 DERL2Q9GZP9 239 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 IL22Q9GZX6 179 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 OPN3Q9H1Y3 402 aaPredicted RBP3.21□□□□□ -1.9
TDP1-207ENST00000553617 DHX33Q9H6R0 707 aaKnown RBP3.21□□□□□ -1.9
TDP1-207ENST00000553617 METTL8Q9H825 291 aaKnown RBP3.21□□□□□ -1.9
TDP1-207ENST00000553617 SGK2Q9HBY8 427 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 FGF22Q9HCT0 170 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 SLC40A1Q9NP59 571 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 SPHK2Q9NRA0 654 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 DEPPQ9NTK1 212 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 NDE1Q9NXR1 346 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 MRPL39Q9NYK5 338 aaKnown RBP3.21□□□□□ -1.9
TDP1-207ENST00000553617 MTCH1Q9NZJ7 389 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 THAP10Q9P2Z0 257 aaPredicted RBP3.21□□□□□ -1.9
TDP1-207ENST00000553617 RNF14Q9UBS8 474 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 CACNG5Q9UF02 275 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 PISDQ9UG56 409 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 EXOGQ9Y2C4 368 aaKnown RBP3.21□□□□□ -1.9
TDP1-207ENST00000553617 RBMX2Q9Y388 322 aaKnown RBP3.21□□□□□ -1.9
TDP1-207ENST00000553617 OR10H1Q9Y4A9 318 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 FHAD1B1AJZ9 1412 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 BCLAF3A2AJT9 711 aaKnown RBP3.2□□□□□ -1.9
TDP1-207ENST00000553617 IGLON5A6NGN9 336 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 RNF212BA8MTL3 300 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 ARHGEF33A8MVX0 844 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 PGRMC1O00264 195 aaKnown RBP3.2□□□□□ -1.9
TDP1-207ENST00000553617 EI24O14681 340 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 ITGB1BP1O14713 200 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 AIM2O14862 343 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 TM9SF1O15321 606 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 EIF3HO15372 352 aaKnown RBP eCLIP3.2□□□□□ -1.9
TDP1-207ENST00000553617 GATCO43716 136 aaKnown RBP3.2□□□□□ -1.9
TDP1-207ENST00000553617 OR1F1O43749 312 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 DUX1O43812 170 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 ANP32DO95626 131 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 RAB3DO95716 219 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 HMGN1P05114 100 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 KRT7P08729 469 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 HOXB7P09629 217 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 ZSCAN5DPP0CG00 497 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 ZNF44P15621 663 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 ATF6P18850 670 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 GNA11P29992 359 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 YWHABP31946 246 aaKnown RBP3.2□□□□□ -1.9
TDP1-207ENST00000553617 HMGCLP35914 325 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 CDKN2CP42773 168 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 RAB9AP51151 201 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 IST1P53990 364 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 BDH1Q02338 343 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 FGL1Q08830 312 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 PJVKQ0ZLH3 352 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 CDC20Q12834 499 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 PMS2P3Q13401 168 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 CAMK4Q16566 473 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 CCDC153Q494R4 210 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 XKR7Q5GH72 579 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 C6orf183Q5T699 404 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 LINC00242Q5T6M2 205 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 ZSCAN25Q6NSZ9 544 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 RFWD3Q6PCD5 774 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 GDPGP1Q6ZNW5 385 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 FAM122BQ7Z309 247 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 C16orf62Q7Z3J2 963 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 ANKRD37Q7Z713 158 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 PARGQ86W56 976 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 ZFAND4Q86XD8 727 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 RBM45Q8IUH3 476 aaKnown RBP3.2□□□□□ -1.9
TDP1-207ENST00000553617 CCDC71Q8IV32 467 aaPredicted RBP3.2□□□□□ -1.9
TDP1-207ENST00000553617 KLHDC8BQ8IXV7 354 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 MICU2Q8IYU8 434 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 TBC1D19Q8N5T2 526 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 OR52B6Q8NGF0 335 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 OR5D13Q8NGL4 314 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 OR13C9Q8NGT0 318 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 TRMT10AQ8TBZ6 339 aaKnown RBP3.2□□□□□ -1.9
TDP1-207ENST00000553617 CACNG8Q8WXS5 425 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 EMG1Q92979 244 aaKnown RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms