RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 TOMM34Q15785 309 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-219ENST00000553488 UAP1Q16222 522 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-219ENST00000553488 CR1LQ2VPA4 569 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 TMEM176BQ3YBM2 270 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-219ENST00000553488 UNC50Q53HI1 259 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 ARL13AQ5H913 290 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-219ENST00000553488 ZNF678Q5SXM1 525 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 LIPNQ5VXI9 398 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 ABLIM2Q6H8Q1 611 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 SLC22A25Q6T423 547 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 CBLN3Q6UW01 205 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 TMEM108Q6UXF1 575 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 GPRIN3Q6ZVF9 776 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 ZNF551Q7Z340 670 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-219ENST00000553488 MISPQ8IVT2 679 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 FBXL14Q8N1E6 418 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 SLC43A2Q8N370 569 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 CDRT4Q8N9R6 151 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 SLC16A11Q8NCK7 471 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 SEMA6DQ8NFY4 1073 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 B4GALNT2Q8NHY0 566 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 CDC26Q8NHZ8 85 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 FBXO30Q8TB52 745 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 GPR151Q8TDV0 419 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 MUCL1Q96DR8 90 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 REXO5Q96IC2 774 aaKnown RBP6.37□□□□□ -1.39
ATXN3-219ENST00000553488 SORCS2Q96PQ0 1159 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 KCNA7Q96RP8 456 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 MRPL57Q9BQC6 102 aaKnown RBP6.37□□□□□ -1.39
ATXN3-219ENST00000553488 TIGARQ9NQ88 270 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 MIEF1Q9NQG6 463 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 NTMQ9P121 344 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 KLHL9Q9P2J3 617 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 ICAM5Q9UMF0 924 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 NFU1Q9UMS0 254 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 MGAT4BQ9UQ53 548 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 SAR1BQ9Y6B6 198 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 NOTCH1P46531 2555 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 ESYT3A0FGR9 886 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 GJE1A6NN92 205 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 C22orf46C9J442 243 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 NPIPB8E9PQR5 432 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 ZNF195O14628 629 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 PRPS2P11908 318 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 APEHP13798 732 aaKnown RBP6.36□□□□□ -1.39
ATXN3-219ENST00000553488 EGR1P18146 543 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 HOXA5P20719 270 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 FPR2P25090 351 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 HMOX2P30519 316 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 LCN1P31025 176 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 PDLIM4P50479 330 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 FABP6P51161 128 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 ZNF83P51522 516 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 FOXG1P55316 489 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-219ENST00000553488 FOXA1P55317 472 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 SUMO3P55854 103 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-219ENST00000553488 RAC3P60763 192 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 RPL11P62913 178 aaKnown RBP6.36□□□□□ -1.39
ATXN3-219ENST00000553488 SLC25A3Q00325 362 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 CAV1Q03135 178 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 C2orf80Q0P641 193 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 RASGEF1BQ0VAM2 473 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 HSPB3Q12988 150 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 SELENBP1Q13228 472 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 DUSP5Q16690 384 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 MST1LQ2TV78 715 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 FAM174BQ3ZCQ3 159 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 VPS26BQ4G0F5 336 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 SLC25A53Q5H9E4 307 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.36□□□□□ -1.39
ATXN3-219ENST00000553488 CCNJQ5T5M9 372 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 IKBIPQ70UQ0 350 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 OR6Y1Q8NGX8 325 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 OR52N5Q8NH56 324 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 OR2W6PQ8NHA6 318 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 METTL6Q8TCB7 284 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 ZNF764Q96H86 408 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-219ENST00000553488 MRGPRX4Q96LA9 322 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 MS4A4EQ96PG1 132 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 PIMREGQ9BSJ6 248 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 INPP5KQ9BT40 448 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 FUT8Q9BYC5 575 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 UBQLN4Q9NRR5 601 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 MALT1Q9UDY8 824 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 POU2F3Q9UKI9 436 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 TRAF6Q9Y4K3 522 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 POLR3HQ9Y535 204 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-219ENST00000553488 TIMM22Q9Y584 194 aa6.36□□□□□ -1.39
ATXN3-219ENST00000553488 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.36□□□□□ -1.39
ATXN3-219ENST00000553488 IGKV3D-15A0A087WSY6 115 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 A0A1W2PR80 420 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 ZNF716A6NP11 495 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 C9JVG2 144 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 ATP6V1G2-DDX39BF2Z307 99 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 NPIPB9F8W1W9 429 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 PDLIM1O00151 329 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 SCDO00767 359 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 PDPK1O15530 556 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 ZSCAN12O43309 604 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 KIAA0513O60268 411 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms