RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 OR52P1PQ8NH57 321 aa11.51□□□□□ -0.57
ACTN1-207ENST00000553290 GTF2H4Q92759 462 aa11.51□□□□□ -0.57
ACTN1-207ENST00000553290 PIGTQ969N2 578 aa11.51□□□□□ -0.57
ACTN1-207ENST00000553290 PIP5K1AQ99755 562 aa11.51□□□□□ -0.57
ACTN1-207ENST00000553290 CCDC28BQ9BUN5 200 aa11.51□□□□□ -0.57
ACTN1-207ENST00000553290 RAD21L1Q9H4I0 556 aa11.51□□□□□ -0.57
ACTN1-207ENST00000553290 SLCO1B3Q9NPD5 702 aa11.51□□□□□ -0.57
ACTN1-207ENST00000553290 ARGLU1Q9NWB6 273 aaPredicted RBP11.51□□□□□ -0.57
ACTN1-207ENST00000553290 EMC3Q9P0I2 261 aa11.51□□□□□ -0.57
ACTN1-207ENST00000553290 ING1Q9UK53 422 aaPredicted RBP11.51□□□□□ -0.57
ACTN1-207ENST00000553290 TRAPPC4Q9Y296 219 aa11.51□□□□□ -0.57
ACTN1-207ENST00000553290 FREM1Q5H8C1 2179 aa11.51□□□□□ -0.57
ACTN1-207ENST00000553290 TMED7-TICAM2A0A0A6YYA0 188 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 A0A0G2JPF8 293 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-207ENST00000553290 CFAP73A6NFT4 308 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 HMGB1P1B2RPK0 211 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-207ENST00000553290 HNRNPCL2B2RXH8 293 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 HNRNPCL3B7ZW38 293 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 AP3D1O14617 1153 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 ZNF208O43345 1280 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 HNRNPCL1O60812 293 aaKnown RBP11.5□□□□□ -0.57
ACTN1-207ENST00000553290 CNOT4O95628 575 aaKnown RBP11.5□□□□□ -0.57
ACTN1-207ENST00000553290 ADAP00813 363 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 BCHEP06276 602 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 TFPTP0C1Z6 253 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 HNRNPCL4P0DMR1 293 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 IL32P24001 234 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 IDH3AP50213 366 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 POLR2HP52434 150 aaKnown RBP11.5□□□□□ -0.57
ACTN1-207ENST00000553290 RIPPLY3P57055 190 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 ADAM8P78325 824 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 IRX1P78414 480 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-207ENST00000553290 EPS8Q12929 822 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 FADDQ13158 208 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 ITGADQ13349 1161 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 LARS2Q15031 903 aaKnown RBP11.5□□□□□ -0.57
ACTN1-207ENST00000553290 RGNQ15493 299 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 GTDC1Q4AE62 458 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 LIN52Q52LA3 116 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 ABLIM2Q6H8Q1 611 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 C20orf204Q6ZNR8 217 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 Q6ZT83 130 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 GALNT5Q7Z7M9 940 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 WFDC8Q8IUA0 241 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 SLC38A5Q8WUX1 472 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 HSD17B8Q92506 261 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 KISS1RQ969F8 398 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-207ENST00000553290 DDIT4LQ96D03 193 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 AURKBQ96GD4 344 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-207ENST00000553290 ARL5BQ96KC2 179 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 HS3ST6Q96QI5 342 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 PAIP1Q9H074 479 aaKnown RBP11.5□□□□□ -0.57
ACTN1-207ENST00000553290 ARMC7Q9H6L4 198 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 VIPAS39Q9H9C1 493 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 UBTD1Q9HAC8 227 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 CACYBPQ9HB71 228 aaKnown RBP11.5□□□□□ -0.57
ACTN1-207ENST00000553290 TMEM45AQ9NWC5 275 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 OSGIN1Q9UJX0 560 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 ZNF232Q9UNY5 417 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 TMED7Q9Y3B3 224 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 PCDHB14Q9Y5E9 798 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 DSPPQ9NZW4 1301 aa11.5□□□□□ -0.57
ACTN1-207ENST00000553290 IGKV3D-15A0A087WSY6 115 aa11.49□□□□□ -0.57
ACTN1-207ENST00000553290 A0A096LPI6 279 aa11.49□□□□□ -0.57
ACTN1-207ENST00000553290 CDHR4A6H8M9 788 aa11.49□□□□□ -0.57
ACTN1-207ENST00000553290 ZNF814B7Z6K7 855 aa11.49□□□□□ -0.57
ACTN1-207ENST00000553290 CLIC1O00299 241 aa11.49□□□□□ -0.57
ACTN1-207ENST00000553290 GPR171O14626 319 aa11.49□□□□□ -0.57
ACTN1-207ENST00000553290 EIF1BO60739 113 aaKnown RBP11.49□□□□□ -0.57
ACTN1-207ENST00000553290 THBS1P07996 1170 aa11.49□□□□□ -0.57
ACTN1-207ENST00000553290 TACR3P29371 465 aa11.49□□□□□ -0.57
ACTN1-207ENST00000553290 HOXC12P31275 282 aa11.49□□□□□ -0.57
ACTN1-207ENST00000553290 AQP5P55064 265 aa11.49□□□□□ -0.57
ACTN1-207ENST00000553290 SLC2A7Q6PXP3 512 aa11.49□□□□□ -0.57
ACTN1-207ENST00000553290 BLOC1S3Q6QNY0 202 aa11.49□□□□□ -0.57
ACTN1-207ENST00000553290 VRK2Q86Y07 508 aa11.49□□□□□ -0.57
ACTN1-207ENST00000553290 ZNF100Q8IYN0 542 aa11.49□□□□□ -0.57
ACTN1-207ENST00000553290 LRRC75A-AS1Q8N1F1 130 aa11.49□□□□□ -0.57
ACTN1-207ENST00000553290 PIGXQ8TBF5 258 aa11.49□□□□□ -0.57
ACTN1-207ENST00000553290 S100PBPQ96BU1 408 aa11.49□□□□□ -0.57
ACTN1-207ENST00000553290 ZNF775Q96BV0 537 aaPredicted RBP11.49□□□□□ -0.57
ACTN1-207ENST00000553290 PLPPR2Q96GM1 343 aa11.49□□□□□ -0.57
ACTN1-207ENST00000553290 ZNF300Q96RE9 604 aaPredicted RBP11.49□□□□□ -0.57
ACTN1-207ENST00000553290 EBF4Q9BQW3 602 aa11.49□□□□□ -0.57
ACTN1-207ENST00000553290 OR11A1Q9GZK7 315 aa11.49□□□□□ -0.57
ACTN1-207ENST00000553290 NGBQ9NPG2 151 aa11.49□□□□□ -0.57
ACTN1-207ENST00000553290 INTS9Q9NV88 658 aaKnown RBP11.49□□□□□ -0.57
ACTN1-207ENST00000553290 TMEM181Q9P2C4 612 aa11.49□□□□□ -0.57
ACTN1-207ENST00000553290 ZNF443Q9Y2A4 671 aaPredicted RBP11.49□□□□□ -0.57
ACTN1-207ENST00000553290 IFT52Q9Y366 437 aa11.49□□□□□ -0.57
ACTN1-207ENST00000553290 TMEM72A0PK05 275 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 ZNF716A6NP11 495 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 ARHGEF9O43307 516 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 SMPD2O60906 423 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 BMP2P12643 396 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 FOSL1P15407 271 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 CCNA2P20248 432 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 CXCR1P25024 350 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 ATP4BP51164 291 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms