RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 KDM7AQ6ZMT4 941 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 STXBP4Q6ZWJ1 553 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 NAXDQ8IW45 347 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 MAPK1IP1LQ8NDC0 245 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 OR2A12Q8NGT7 310 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 PAQR8Q8TEZ7 354 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 AGAP11Q8TF27 550 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 HTR3CQ8WXA8 447 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 C1orf147Q96MC9 270 aaPredicted RBP3.87□□□□□ -1.79
SCFD1-209ENST00000553280 CLCC1Q96S66 551 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 CCT8L2Q96SF2 557 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 TRIM62Q9BVG3 475 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 NHEJ1Q9H9Q4 299 aaPredicted RBP3.87□□□□□ -1.79
SCFD1-209ENST00000553280 CAB39Q9Y376 341 aaPredicted RBP3.87□□□□□ -1.79
SCFD1-209ENST00000553280 A0A087WWV3 80 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 IGHV3-35A0A0C4DH35 117 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 A0A1B0GUS0 222 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 DHRS7CA6NNS2 312 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 SRRM5B3KS81 715 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 IDSB3KWA1 339 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 KIF2AO00139 706 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-209ENST00000553280 RGS16O15492 202 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-209ENST00000553280 CRYGBP07316 175 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 STSP08842 583 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 ZNF853P0CG23 659 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 ATP1B2P14415 290 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-209ENST00000553280 CAPN2P17655 700 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 SHC1P29353 583 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 CASP14P31944 242 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 LEPP41159 167 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 PTGDSP41222 190 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 CRYBB2P43320 205 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 PRRX1P54821 245 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 RPS8P62241 208 aaKnown RBP3.86□□□□□ -1.79
SCFD1-209ENST00000553280 CXCL6P80162 114 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 CDK16Q00536 496 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 CHRNB3Q05901 458 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 CD47Q08722 323 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 SLC10A7Q0GE19 358 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 BST2Q10589 180 aaKnown RBP3.86□□□□□ -1.79
SCFD1-209ENST00000553280 VGLL4Q14135 290 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 TGIF1Q15583 401 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 QRICH1Q2TAL8 776 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 PRAMEF20Q5VT98 475 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 C17orf82Q86X59 251 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-209ENST00000553280 CCDC65Q8IXS2 484 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 NUP58Q9BVL2 599 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 SRXN1Q9BYN0 137 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 ANKRD19PQ9H560 264 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 AZI2Q9H6S1 392 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 NIPAL2Q9H841 368 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 MIEF1Q9NQG6 463 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 OR1A1Q9P1Q5 309 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 PISDQ9UG56 409 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 KIF26BQ2KJY2 2108 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 POGZQ7Z3K3 1410 aa3.86□□□□□ -1.79
SCFD1-209ENST00000553280 VSTM2BA6NLU5 285 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 MCF2P10911 925 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 HOXD10P28358 340 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 CD1CP29017 333 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 OPRD1P41143 372 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 SLC25A1P53007 311 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 SLC8A3P57103 927 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 LMO4P61968 165 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 GRB7Q14451 532 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 BCL7AQ4VC05 210 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 PAN3Q58A45 887 aaKnown RBP3.85□□□□□ -1.79
SCFD1-209ENST00000553280 ENPP6Q6UWR7 440 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 GPR65Q8IYL9 337 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 OR2L3Q8NG85 312 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 OR52H1Q8NGJ2 320 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 KCNG3Q8TAE7 436 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 FAM110BQ8TC76 370 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 CXorf40BQ96DE9 158 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 NUS1Q96E22 293 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 C12orf42Q96LP6 360 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 RNF2Q99496 336 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 FAM192AQ9GZU8 254 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 NCOR1P1Q9H4R4 102 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 REEP4Q9H6H4 257 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 NT5MQ9NPB1 228 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 BFARQ9NZS9 450 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 PAK5Q9P286 719 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 SLC7A8Q9UHI5 535 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 ABCG2Q9UNQ0 655 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 COPS3Q9UNS2 423 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 PLLPQ9Y342 182 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.85□□□□□ -1.79
SCFD1-209ENST00000553280 PCNX3Q9H6A9 2034 aa3.85□□□□□ -1.79
SCFD1-209ENST00000553280 TCRBV9S1A1TA0A576 114 aa3.84□□□□□ -1.79
SCFD1-209ENST00000553280 CCDC182A6NF36 153 aa3.84□□□□□ -1.79
SCFD1-209ENST00000553280 DNALI1O14645 258 aaPredicted RBP3.84□□□□□ -1.79
SCFD1-209ENST00000553280 CACNG3O60359 315 aa3.84□□□□□ -1.79
SCFD1-209ENST00000553280 ZNF254O75437 659 aa3.84□□□□□ -1.79
SCFD1-209ENST00000553280 CST1P01037 141 aa3.84□□□□□ -1.79
SCFD1-209ENST00000553280 TROVE2P10155 538 aaKnown RBP eCLIP3.84□□□□□ -1.79
SCFD1-209ENST00000553280 GALP22466 123 aa3.84□□□□□ -1.79
SCFD1-209ENST00000553280 ANXA13P27216 316 aa3.84□□□□□ -1.79
SCFD1-209ENST00000553280 GCKP35557 465 aa3.84□□□□□ -1.79
SCFD1-209ENST00000553280 DDOSTP39656 456 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms