RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 SLC19A3Q9BZV2 496 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 RERGLQ9H628 205 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 ISG20L2Q9H9L3 353 aaKnown RBP12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 ABCB10Q9NRK6 738 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 INPP5EQ9NRR6 644 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 CHRNA9Q9UGM1 479 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 GSTK1Q9Y2Q3 226 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 IQCMA0A1B0GVH7 501 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 DAPL1A0PJW8 107 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 FUOMA2VDF0 154 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 GTPBP1O00178 669 aaKnown RBP12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 TOX3O15405 576 aaPredicted RBP12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 ZNF264O43296 627 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 TBX1O43435 398 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 REM1O75628 298 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 OR7A10O76100 309 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 CLEC2LP0C7M8 214 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 PNLIPP16233 465 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 CELP19835 753 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 EPHA8P29322 1005 aaPredicted RBP12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 LCN1P31025 176 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 TNFSF8P32971 234 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 BDH1Q02338 343 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 MXD1Q05195 221 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 RUNX1T1Q06455 604 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 DBPQ10586 325 aaPredicted RBP12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 GALEQ14376 348 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 EBPQ15125 230 aaKnown RBP12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 ZNF574Q6ZN55 896 aaPredicted RBP12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 PLEKHG7Q6ZR37 379 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 KLBQ86Z14 1044 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 PRSS58Q8IYP2 241 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 SNRNP27Q8WVK2 155 aaKnown RBP12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 CEP19Q96LK0 163 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 GAL3ST4Q96RP7 486 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 ADOQ96SZ5 270 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 TIMP4Q99727 224 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 COQ7Q99807 217 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 ALG8Q9BVK2 526 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 VN1R1Q9GZP7 353 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 TPK1Q9H3S4 243 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 ASB6Q9NWX5 421 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 HAO2Q9NYQ3 351 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 MKL2Q9ULH7 1088 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 ZNF337Q9Y3M9 751 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 FER1L5A0AVI2 2057 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 IGKV1D-42A0A075B6H8 117 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 HTR3EA5X5Y0 456 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 LRRN3E7EW58 273 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 LOC110117498-PIK3R3F6TDL0 507 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 SBK2P0C263 348 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 CLUP10909 449 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 PNMTP11086 282 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 SDC2P34741 201 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 BCAP31P51572 246 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 SLC16A1P53985 500 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 SQSTM1Q13501 440 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 TBC1D25Q3MII6 688 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 CBLN3Q6UW01 205 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 TMPRSS9Q7Z410 1059 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 ZNF554Q86TJ5 538 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 ATG4DQ86TL0 474 aaPredicted RBP12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 C9orf40Q8IXQ3 194 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 PRR22Q8IZ63 422 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 ARIH2OSQ8N7S6 290 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 PLPP5Q8NEB5 264 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 FAM83FQ8NEG4 500 aaPredicted RBP12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 ATP6V1C2Q8NEY4 427 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 OR10H4Q8NGA5 316 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 OR52E2Q8NGJ4 325 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 LRFN5Q96NI6 719 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 TBX5Q99593 518 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 SLC30A2Q9BRI3 323 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 DUSP23Q9BVJ7 150 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 LRRN3Q9H3W5 708 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 BABAM2Q9NXR7 383 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 KLHL21Q9UJP4 597 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 FBXL4Q9UKA2 621 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 ATXN7L1Q9ULK2 861 aaPredicted RBP12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 PCDHGB6Q9Y5F9 930 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 IER3IP1Q9Y5U9 82 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 CACNA1EQ15878 2313 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 LAMA1P25391 3075 aa12.83□□□□□ -0.36
RAB3IP-216ENST00000552199 A0A1B0GTQ1 180 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 ELOA3DA6NLF2 546 aaPredicted RBP12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 MCIDASD6RGH6 385 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 TO15178 435 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 IGF2P01344 180 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 GAAP10253 952 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 HIST1H1CP16403 213 aaKnown RBP12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 GTF2E2P29084 291 aaKnown RBP12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 TGM4P49221 684 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 HNRNPA0Q13151 305 aaKnown RBP12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 GPR50Q13585 617 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 DNASE1L3Q13609 305 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 NR0B2Q15466 257 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 ELOA3BQ3SY89 546 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 HLA-DQA1Q5Y7H0 255 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 STEAP3Q658P3 488 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 VASNQ6EMK4 673 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms