RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 NPAS1Q99742 590 aa17.95■□□□□ 0.46
SSH1-209ENST00000551165 STRADBQ9C0K7 418 aa17.95■□□□□ 0.46
SSH1-209ENST00000551165 PCNX2A6NKB5 2137 aa17.95■□□□□ 0.46
SSH1-209ENST00000551165 ZC3H12DA2A288 527 aaKnown RBP17.95■□□□□ 0.46
SSH1-209ENST00000551165 SOCS6O14544 535 aa17.95■□□□□ 0.46
SSH1-209ENST00000551165 RCBTB2O95199 551 aa17.95■□□□□ 0.46
SSH1-209ENST00000551165 SLC1A3P43003 542 aa17.95■□□□□ 0.46
SSH1-209ENST00000551165 TMBIM6P55061 237 aa17.95■□□□□ 0.46
SSH1-209ENST00000551165 LSM3P62310 102 aaKnown RBP17.95■□□□□ 0.46
SSH1-209ENST00000551165 LSAMPQ13449 338 aa17.95■□□□□ 0.46
SSH1-209ENST00000551165 CTF1Q16619 201 aa17.95■□□□□ 0.46
SSH1-209ENST00000551165 MEDAGQ5VYS4 303 aa17.95■□□□□ 0.46
SSH1-209ENST00000551165 LNX2Q8N448 690 aa17.95■□□□□ 0.46
SSH1-209ENST00000551165 OR52I1Q8NGK6 324 aa17.95■□□□□ 0.46
SSH1-209ENST00000551165 ELP5Q8TE02 316 aa17.95■□□□□ 0.46
SSH1-209ENST00000551165 LGALS12Q96DT0 336 aa17.95■□□□□ 0.46
SSH1-209ENST00000551165 PLEKHA8Q96JA3 519 aa17.95■□□□□ 0.46
SSH1-209ENST00000551165 MOGAT1Q96PD6 335 aa17.95■□□□□ 0.46
SSH1-209ENST00000551165 ADAM19Q9H013 955 aa17.95■□□□□ 0.46
SSH1-209ENST00000551165 FOXJ2Q9P0K8 574 aa17.95■□□□□ 0.46
SSH1-209ENST00000551165 ENPP5Q9UJA9 477 aa17.95■□□□□ 0.46
SSH1-209ENST00000551165 CELSR3Q9NYQ7 3312 aa17.94■□□□□ 0.46
SSH1-209ENST00000551165 PRODHO43272 600 aa17.94■□□□□ 0.46
SSH1-209ENST00000551165 HCN1O60741 890 aa17.94■□□□□ 0.46
SSH1-209ENST00000551165 JMJD7P0C870 316 aa17.94■□□□□ 0.46
SSH1-209ENST00000551165 FOXK2Q01167 660 aa17.94■□□□□ 0.46
SSH1-209ENST00000551165 LTBQ06643 244 aa17.94■□□□□ 0.46
SSH1-209ENST00000551165 PLBD1Q6P4A8 553 aa17.94■□□□□ 0.46
SSH1-209ENST00000551165 OR8K3Q8NH51 312 aa17.94■□□□□ 0.46
SSH1-209ENST00000551165 RPL3LQ92901 407 aaKnown RBP17.94■□□□□ 0.46
SSH1-209ENST00000551165 KTI12Q96EK9 354 aaPredicted RBP17.94■□□□□ 0.46
SSH1-209ENST00000551165 RNFT2Q96EX2 444 aa17.94■□□□□ 0.46
SSH1-209ENST00000551165 TMEM80Q96HE8 168 aa17.94■□□□□ 0.46
SSH1-209ENST00000551165 IMMP1LQ96LU5 166 aa17.94■□□□□ 0.46
SSH1-209ENST00000551165 TAPBPLQ9BX59 468 aa17.94■□□□□ 0.46
SSH1-209ENST00000551165 CDC40O60508 579 aaKnown RBP eCLIP17.94■□□□□ 0.46
SSH1-209ENST00000551165 MT-CO3P00414 261 aa17.94■□□□□ 0.46
SSH1-209ENST00000551165 TIGD6Q17RP2 521 aa17.94■□□□□ 0.46
SSH1-209ENST00000551165 C1QL3Q5VWW1 255 aa17.94■□□□□ 0.46
SSH1-209ENST00000551165 OR10G3Q8NGC4 313 aa17.94■□□□□ 0.46
SSH1-209ENST00000551165 OR5L2Q8NGL0 311 aa17.94■□□□□ 0.46
SSH1-209ENST00000551165 OR5W2Q8NH69 310 aa17.94■□□□□ 0.46
SSH1-209ENST00000551165 DEFB126Q9BYW3 111 aa17.94■□□□□ 0.46
SSH1-209ENST00000551165 OSGIN1Q9UJX0 560 aa17.94■□□□□ 0.46
SSH1-209ENST00000551165 PADI1Q9ULC6 663 aa17.94■□□□□ 0.46
SSH1-209ENST00000551165 SDK2Q58EX2 2172 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 KNTC1P50748 2209 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 DMXL1Q9Y485 3027 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 MCIDASD6RGH6 385 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 EIF4E2O60573 245 aaKnown RBP17.93■□□□□ 0.46
SSH1-209ENST00000551165 HSMCR30P0CW71 290 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 TCN2P20062 427 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 TGFBR1P36897 503 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 TCF15Q12870 199 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 ANKRD13BQ86YJ7 626 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 ERI1Q8IV48 349 aaKnown RBP17.93■□□□□ 0.46
SSH1-209ENST00000551165 OR11G2Q8NGC1 345 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 NACC2Q96BF6 587 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 TAAR9Q96RI9 348 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 ZNF700Q9H0M5 742 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 TRIM64BA6NI03 449 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 HMGN1P05114 100 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 PNMTP11086 282 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 NOS3P29474 1203 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 CDH11P55287 796 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 RAB15P59190 212 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 E2F1Q01094 437 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 SPCS2Q15005 226 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 QPRTQ15274 297 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 MED22Q15528 200 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 COL28A1Q2UY09 1125 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 C6orf15Q6UXA7 325 aaPredicted RBP17.93■□□□□ 0.46
SSH1-209ENST00000551165 MARCH9Q86YJ5 346 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 CYB561A3Q8NBI2 242 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 GPR119Q8TDV5 335 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 CT55Q8WUE5 264 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 RASL10BQ96S79 203 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 PRRG3Q9BZD7 231 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 SPRY4Q9C004 299 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 FAM86C1Q9NVL1 165 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 FBXL4Q9UKA2 621 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 ADAM18Q9Y3Q7 739 aa17.93■□□□□ 0.46
SSH1-209ENST00000551165 OR7A10O76100 309 aa17.92■□□□□ 0.46
SSH1-209ENST00000551165 CYC1P08574 325 aa17.92■□□□□ 0.46
SSH1-209ENST00000551165 CD36P16671 472 aa17.92■□□□□ 0.46
SSH1-209ENST00000551165 FOLR3P41439 243 aa17.92■□□□□ 0.46
SSH1-209ENST00000551165 SLC6A8P48029 635 aa17.92■□□□□ 0.46
SSH1-209ENST00000551165 MTNR1AP48039 350 aa17.92■□□□□ 0.46
SSH1-209ENST00000551165 ETV1P50549 477 aa17.92■□□□□ 0.46
SSH1-209ENST00000551165 P2RX1P51575 399 aa17.92■□□□□ 0.46
SSH1-209ENST00000551165 EFR3AQ14156 821 aa17.92■□□□□ 0.46
SSH1-209ENST00000551165 INPP5JQ15735 1006 aaPredicted RBP17.92■□□□□ 0.46
SSH1-209ENST00000551165 RTL4Q6ZR62 310 aa17.92■□□□□ 0.46
SSH1-209ENST00000551165 CXXC5Q7LFL8 322 aaKnown RBP17.92■□□□□ 0.46
SSH1-209ENST00000551165 CYP4Z2PQ8N1L4 340 aa17.92■□□□□ 0.46
SSH1-209ENST00000551165 MOSPD2Q8NHP6 518 aa17.92■□□□□ 0.46
SSH1-209ENST00000551165 RAB2BQ8WUD1 216 aa17.92■□□□□ 0.46
SSH1-209ENST00000551165 PTP4A1Q93096 173 aa17.92■□□□□ 0.46
SSH1-209ENST00000551165 PLD2O14939 933 aa17.91■□□□□ 0.46
SSH1-209ENST00000551165 DLGAP3O95886 979 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms