RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 IRF2BPLQ9H1B7 796 aa15.1■□□□□ 0.01
CUX1-213ENST00000549414 SEMA6CQ9H3T2 930 aa15.1■□□□□ 0.01
CUX1-213ENST00000549414 ZNF639Q9UID6 485 aa15.1■□□□□ 0.01
CUX1-213ENST00000549414 L7N2F9 121 aa15.1■□□□□ 0.01
CUX1-213ENST00000549414 IL1AP01583 271 aa15.1■□□□□ 0.01
CUX1-213ENST00000549414 MAKP20794 623 aa15.1■□□□□ 0.01
CUX1-213ENST00000549414 RPS19P39019 145 aaKnown RBP15.1■□□□□ 0.01
CUX1-213ENST00000549414 ART1P52961 327 aa15.1■□□□□ 0.01
CUX1-213ENST00000549414 GNG2P59768 71 aa15.1■□□□□ 0.01
CUX1-213ENST00000549414 FOXK2Q01167 660 aa15.1■□□□□ 0.01
CUX1-213ENST00000549414 Q6ZS52 159 aa15.1■□□□□ 0.01
CUX1-213ENST00000549414 SLC35D2Q76EJ3 337 aa15.1■□□□□ 0.01
CUX1-213ENST00000549414 C15orf40Q8WUR7 153 aa15.1■□□□□ 0.01
CUX1-213ENST00000549414 CCDC107Q8WV48 283 aa15.1■□□□□ 0.01
CUX1-213ENST00000549414 ITFG2Q969R8 447 aa15.1■□□□□ 0.01
CUX1-213ENST00000549414 FGF21Q9NSA1 209 aa15.1■□□□□ 0.01
CUX1-213ENST00000549414 TDRD15B5MCY1 1934 aaKnown RBP15.1■□□□□ 0.01
CUX1-213ENST00000549414 TMEM72A0PK05 275 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 MEIS3P1A6NDR6 274 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 UPK1AO00322 258 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 FUCA1P04066 466 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 PITPNBP48739 271 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 ZNF511Q8NB15 262 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 EDAQ92838 391 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 KLHL15Q96M94 604 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 ZNF226Q9NYT6 803 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 SCN3AQ9NY46 2000 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 C3orf38Q5JPI3 329 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 ARL14Q8N4G2 192 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 OR13C3Q8NGS6 347 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 CHPT1Q8WUD6 406 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 SENP5Q96HI0 755 aaPredicted RBP15.09■□□□□ 0.01
CUX1-213ENST00000549414 HIST1H2AAQ96QV6 131 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 TCEAL2Q9H3H9 227 aaPredicted RBP15.09■□□□□ 0.01
CUX1-213ENST00000549414 MMP17Q9ULZ9 603 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 DIMT1Q9UNQ2 313 aaKnown RBP15.09■□□□□ 0.01
CUX1-213ENST00000549414 SERINC4A6NH21 518 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 ZNF264O43296 627 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 WISP3O95389 354 aaPredicted RBP15.09■□□□□ 0.01
CUX1-213ENST00000549414 CYB5AP00167 134 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 SLC35E2P0CK97 266 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 ENDOUP21128 410 aaKnown RBP15.09■□□□□ 0.01
CUX1-213ENST00000549414 TACR3P29371 465 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 ACY1Q03154 408 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 ZNF793Q6ZN11 406 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 SLC22A8Q8TCC7 542 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 DUSP19Q8WTR2 217 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 NUDT22Q9BRQ3 303 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 POU2F3Q9UKI9 436 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 CKAP5Q14008 2032 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 C2orf72A6NCS6 295 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 METTL15A6NJ78 407 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 DOK2O60496 412 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 DRD3P35462 400 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 ETV5P41161 510 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 ETV1P50549 477 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 WBP2NLQ6ICG8 309 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 FAHD1Q6P587 224 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 GHSRQ92847 366 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 OR5B2Q96R09 309 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 PHF7Q9BWX1 381 aaPredicted RBP15.09■□□□□ 0.01
CUX1-213ENST00000549414 ZNF337Q9Y3M9 751 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 SCN10AQ9Y5Y9 1956 aa15.09■□□□□ 0.01
CUX1-213ENST00000549414 RBBP6Q7Z6E9 1792 aaKnown RBP15.09■□□□□ 0.01
CUX1-213ENST00000549414 TTC28Q96AY4 2481 aa15.08■□□□□ 0.01
CUX1-213ENST00000549414 YY2O15391 372 aa15.08■□□□□ 0.01
CUX1-213ENST00000549414 C1QCP02747 245 aa15.08■□□□□ 0.01
CUX1-213ENST00000549414 DNASE1P24855 282 aa15.08■□□□□ 0.01
CUX1-213ENST00000549414 FPR3P25089 353 aa15.08■□□□□ 0.01
CUX1-213ENST00000549414 RUNX2Q13950 521 aa15.08■□□□□ 0.01
CUX1-213ENST00000549414 PLK5Q496M5 336 aa15.08■□□□□ 0.01
CUX1-213ENST00000549414 OR7E24Q6IFN5 339 aa15.08■□□□□ 0.01
CUX1-213ENST00000549414 SMAP2Q8WU79 429 aaPredicted RBP15.08■□□□□ 0.01
CUX1-213ENST00000549414 C7orf34Q96L11 122 aa15.08■□□□□ 0.01
CUX1-213ENST00000549414 YBX2Q9Y2T7 364 aaKnown RBP15.08■□□□□ 0.01
CUX1-213ENST00000549414 IGHV3-20A0A0C4DH32 117 aa15.08■□□□□ 0
CUX1-213ENST00000549414 ZAR1LA6NP61 321 aa15.08■□□□□ 0
CUX1-213ENST00000549414 TNFRSF10CO14798 259 aa15.08■□□□□ 0
CUX1-213ENST00000549414 OR1D5P58170 312 aa15.08■□□□□ 0
CUX1-213ENST00000549414 BTG2P78543 158 aa15.08■□□□□ 0
CUX1-213ENST00000549414 UBE2UQ5VVX9 321 aa15.08■□□□□ 0
CUX1-213ENST00000549414 NPRL2Q8WTW4 380 aa15.08■□□□□ 0
CUX1-213ENST00000549414 GABARAPL3Q9BY60 117 aa15.08■□□□□ 0
CUX1-213ENST00000549414 GABARAPL1Q9H0R8 117 aa15.08■□□□□ 0
CUX1-213ENST00000549414 CST11Q9H112 138 aa15.08■□□□□ 0
CUX1-213ENST00000549414 MED11Q9P086 117 aa15.08■□□□□ 0
CUX1-213ENST00000549414 MEIOCA2RUB1 952 aa15.08■□□□□ 0
CUX1-213ENST00000549414 CDHR4A6H8M9 788 aa15.08■□□□□ 0
CUX1-213ENST00000549414 PLRG1O43660 514 aaKnown RBP15.08■□□□□ 0
CUX1-213ENST00000549414 ANXA3P12429 323 aa15.08■□□□□ 0
CUX1-213ENST00000549414 LCN1P31025 176 aa15.08■□□□□ 0
CUX1-213ENST00000549414 EIF2B1Q14232 305 aaKnown RBP15.08■□□□□ 0
CUX1-213ENST00000549414 NKAPLQ5M9Q1 402 aa15.08■□□□□ 0
CUX1-213ENST00000549414 LACC1Q8IV20 430 aa15.08■□□□□ 0
CUX1-213ENST00000549414 CELF2-AS1Q8N7Q2 184 aa15.08■□□□□ 0
CUX1-213ENST00000549414 BEST4Q8NFU0 473 aa15.08■□□□□ 0
CUX1-213ENST00000549414 INTS14Q96SY0 518 aa15.08■□□□□ 0
CUX1-213ENST00000549414 THAP7Q9BT49 309 aaPredicted RBP15.08■□□□□ 0
CUX1-213ENST00000549414 LMF2Q9BU23 707 aaKnown RBP15.08■□□□□ 0
CUX1-213ENST00000549414 B3GNT3Q9Y2A9 372 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms