RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 UBQLNLQ8IYU4 475 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 SDR9C7Q8NEX9 313 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 OR4K13Q8NH42 304 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 EFHD2Q96C19 240 aaPredicted RBP17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 TTYH1Q9H313 450 aaPredicted RBP17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 PPP1R3EQ9H7J1 279 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 ERVMER34-1Q9H9K5 563 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 MKKSQ9NPJ1 570 aaPredicted RBP17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 MALT1Q9UDY8 824 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 SPAG17Q6Q759 2223 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 MYO15AQ9UKN7 3530 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 J3QLW9 94 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 PLPP2O43688 288 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 SDC3O75056 442 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 IFNGP01579 166 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 ZNF19P17023 458 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 GPR143P51810 404 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 SMAD4Q13485 552 aaKnown RBP17■□□□□ 0.31
PRPF40B-208ENST00000548436 P2RY14Q15391 338 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 CPEB4Q17RY0 729 aaKnown RBP eCLIP17■□□□□ 0.31
PRPF40B-208ENST00000548436 RFLNBQ8N5W9 214 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 ZNF321PQ8N8H1 164 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 SGTBQ96EQ0 304 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 C11orf54Q9H0W9 315 aaPredicted RBP17■□□□□ 0.31
PRPF40B-208ENST00000548436 KCNN2Q9H2S1 579 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 ICAM5Q9UMF0 924 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 IER3IP1Q9Y5U9 82 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 SEC16AO15027 2179 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 FITM1A5D6W6 292 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 C17orf105B2RV13 164 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 H0YIG0 161 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 NDUFB2O95178 105 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 EVX1P49640 407 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 HCCSP53701 268 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 GXYLT1Q4G148 440 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 KLHL26Q53HC5 615 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 TCTE1Q5JU00 501 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 FAM27D1Q5T7N8 215 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 RPTNQ6XPR3 784 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 ZNF517Q6ZMY9 492 aaPredicted RBP17■□□□□ 0.31
PRPF40B-208ENST00000548436 VASH1Q7L8A9 365 aaPredicted RBP17■□□□□ 0.31
PRPF40B-208ENST00000548436 SLC43A2Q8N370 569 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 C17orf47Q8NEP4 570 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 SLC2A12Q8TD20 617 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 ADAM18Q9Y3Q7 739 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 GRIP1Q9Y3R0 1128 aa17■□□□□ 0.31
PRPF40B-208ENST00000548436 TMEM221A6NGB7 291 aa16.99■□□□□ 0.31
PRPF40B-208ENST00000548436 PLA2G10O15496 165 aa16.99■□□□□ 0.31
PRPF40B-208ENST00000548436 SHC1P29353 583 aa16.99■□□□□ 0.31
PRPF40B-208ENST00000548436 HTR3AP46098 478 aa16.99■□□□□ 0.31
PRPF40B-208ENST00000548436 MTNR1BP49286 362 aa16.99■□□□□ 0.31
PRPF40B-208ENST00000548436 RACK1P63244 317 aaKnown RBP16.99■□□□□ 0.31
PRPF40B-208ENST00000548436 SLC3A1Q07837 685 aa16.99■□□□□ 0.31
PRPF40B-208ENST00000548436 KCNJ8Q15842 424 aa16.99■□□□□ 0.31
PRPF40B-208ENST00000548436 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.99■□□□□ 0.31
PRPF40B-208ENST00000548436 GPALPP1Q8IXQ4 340 aa16.99■□□□□ 0.31
PRPF40B-208ENST00000548436 GATSQ8NAP1 163 aa16.99■□□□□ 0.31
PRPF40B-208ENST00000548436 FAM98AQ8NCA5 519 aaKnown RBP16.99■□□□□ 0.31
PRPF40B-208ENST00000548436 PTPMT1Q8WUK0 201 aaPredicted RBP16.99■□□□□ 0.31
PRPF40B-208ENST00000548436 C3orf49Q96BT1 292 aa16.99■□□□□ 0.31
PRPF40B-208ENST00000548436 ZMYND19Q96E35 227 aaPredicted RBP16.99■□□□□ 0.31
PRPF40B-208ENST00000548436 MMP28Q9H239 520 aa16.99■□□□□ 0.31
PRPF40B-208ENST00000548436 CHRDQ9H2X0 955 aa16.99■□□□□ 0.31
PRPF40B-208ENST00000548436 LANCL2Q9NS86 450 aa16.99■□□□□ 0.31
PRPF40B-208ENST00000548436 UCKL1Q9NWZ5 548 aa16.99■□□□□ 0.31
PRPF40B-208ENST00000548436 POU2F3Q9UKI9 436 aa16.99■□□□□ 0.31
PRPF40B-208ENST00000548436 SERTAD2Q14140 314 aa16.98■□□□□ 0.31
PRPF40B-208ENST00000548436 MED25Q71SY5 747 aa16.98■□□□□ 0.31
PRPF40B-208ENST00000548436 OR51L1Q8NGJ5 315 aa16.98■□□□□ 0.31
PRPF40B-208ENST00000548436 OR5J2Q8NH18 312 aa16.98■□□□□ 0.31
PRPF40B-208ENST00000548436 CLIP3Q96DZ5 547 aa16.98■□□□□ 0.31
PRPF40B-208ENST00000548436 TTTY10Q9BZA0 68 aa16.98■□□□□ 0.31
PRPF40B-208ENST00000548436 SLC22A4Q9H015 551 aa16.98■□□□□ 0.31
PRPF40B-208ENST00000548436 PRODH2Q9UF12 536 aa16.98■□□□□ 0.31
PRPF40B-208ENST00000548436 CLCA3PQ9Y6N3 262 aa16.98■□□□□ 0.31
PRPF40B-208ENST00000548436 ASXL3Q9C0F0 2248 aa16.98■□□□□ 0.31
PRPF40B-208ENST00000548436 LMO7DNF2Z398 122 aa16.98■□□□□ 0.31
PRPF40B-208ENST00000548436 OIP5O43482 229 aa16.98■□□□□ 0.31
PRPF40B-208ENST00000548436 TFP02787 698 aa16.98■□□□□ 0.31
PRPF40B-208ENST00000548436 CFL1P23528 166 aaKnown RBP16.98■□□□□ 0.31
PRPF40B-208ENST00000548436 GALNSP34059 522 aa16.98■□□□□ 0.31
PRPF40B-208ENST00000548436 ACVR1BP36896 505 aa16.98■□□□□ 0.31
PRPF40B-208ENST00000548436 OR1D4P47884 311 aa16.98■□□□□ 0.31
PRPF40B-208ENST00000548436 POU4F2Q12837 409 aa16.98■□□□□ 0.31
PRPF40B-208ENST00000548436 CD226Q15762 336 aa16.98■□□□□ 0.31
PRPF40B-208ENST00000548436 MZT2AQ6P582 158 aa16.98■□□□□ 0.31
PRPF40B-208ENST00000548436 RAB43Q86YS6 212 aa16.98■□□□□ 0.31
PRPF40B-208ENST00000548436 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.98■□□□□ 0.31
PRPF40B-208ENST00000548436 ZNRF4Q8WWF5 429 aa16.98■□□□□ 0.31
PRPF40B-208ENST00000548436 PGLYRP3Q96LB9 341 aa16.98■□□□□ 0.31
PRPF40B-208ENST00000548436 PNO1Q9NRX1 252 aaKnown RBP16.98■□□□□ 0.31
PRPF40B-208ENST00000548436 NPAP1Q9NZP6 1156 aa16.98■□□□□ 0.31
PRPF40B-208ENST00000548436 GMEB2Q9UKD1 530 aa16.98■□□□□ 0.31
PRPF40B-208ENST00000548436 SPEGQ15772 3267 aa16.97■□□□□ 0.31
PRPF40B-208ENST00000548436 A8MU76 341 aa16.97■□□□□ 0.31
PRPF40B-208ENST00000548436 A8MUA0 341 aa16.97■□□□□ 0.31
PRPF40B-208ENST00000548436 H3BMH7 237 aa16.97■□□□□ 0.31
PRPF40B-208ENST00000548436 IMPA2O14732 288 aa16.97■□□□□ 0.31
PRPF40B-208ENST00000548436 MAGEB4O15481 346 aaPredicted RBP16.97■□□□□ 0.31
PRPF40B-208ENST00000548436 CD53P19397 219 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms