RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 SSX4O60224 188 aa13.38□□□□□ -0.27
SNX29P1-201ENST00000548357 AK1P00568 194 aa13.38□□□□□ -0.27
SNX29P1-201ENST00000548357 ALDOCP09972 364 aaKnown RBP13.38□□□□□ -0.27
SNX29P1-201ENST00000548357 TFPIP10646 304 aa13.38□□□□□ -0.27
SNX29P1-201ENST00000548357 IMPDH2P12268 514 aa13.38□□□□□ -0.27
SNX29P1-201ENST00000548357 PGCP20142 388 aa13.38□□□□□ -0.27
SNX29P1-201ENST00000548357 IL12AP29459 219 aa13.38□□□□□ -0.27
SNX29P1-201ENST00000548357 CDKN2CP42773 168 aa13.38□□□□□ -0.27
SNX29P1-201ENST00000548357 NME5P56597 212 aa13.38□□□□□ -0.27
SNX29P1-201ENST00000548357 CHRNEQ04844 493 aa13.38□□□□□ -0.27
SNX29P1-201ENST00000548357 IFFO1Q0D2I5 559 aa13.38□□□□□ -0.27
SNX29P1-201ENST00000548357 MPP2Q14168 576 aa13.38□□□□□ -0.27
SNX29P1-201ENST00000548357 CASP8Q14790 479 aa13.38□□□□□ -0.27
SNX29P1-201ENST00000548357 SYPL1Q16563 259 aa13.38□□□□□ -0.27
SNX29P1-201ENST00000548357 C9orf135Q5VTT2 229 aa13.38□□□□□ -0.27
SNX29P1-201ENST00000548357 MTDHQ86UE4 582 aaKnown RBP13.38□□□□□ -0.27
SNX29P1-201ENST00000548357 NUDCD3Q8IVD9 361 aa13.38□□□□□ -0.27
SNX29P1-201ENST00000548357 PIAS4Q8N2W9 510 aaPredicted RBP13.38□□□□□ -0.27
SNX29P1-201ENST00000548357 ANKFN1Q8N957 763 aa13.38□□□□□ -0.27
SNX29P1-201ENST00000548357 CACNG6Q9BXT2 260 aa13.38□□□□□ -0.27
SNX29P1-201ENST00000548357 NGBQ9NPG2 151 aa13.38□□□□□ -0.27
SNX29P1-201ENST00000548357 CHRNA9Q9UGM1 479 aa13.38□□□□□ -0.27
SNX29P1-201ENST00000548357 NOSIPQ9Y314 301 aaKnown RBP13.38□□□□□ -0.27
SNX29P1-201ENST00000548357 WDR45Q9Y484 360 aa13.38□□□□□ -0.27
SNX29P1-201ENST00000548357 TMEM72A0PK05 275 aa13.37□□□□□ -0.27
SNX29P1-201ENST00000548357 ZC3H12DA2A288 527 aaKnown RBP13.37□□□□□ -0.27
SNX29P1-201ENST00000548357 HMGN4O00479 90 aa13.37□□□□□ -0.27
SNX29P1-201ENST00000548357 CD5LO43866 347 aa13.37□□□□□ -0.27
SNX29P1-201ENST00000548357 PMS2P2O95744 297 aa13.37□□□□□ -0.27
SNX29P1-201ENST00000548357 CHRM4P08173 479 aa13.37□□□□□ -0.27
SNX29P1-201ENST00000548357 UQCRC2P22695 453 aa13.37□□□□□ -0.27
SNX29P1-201ENST00000548357 ABCE1P61221 599 aaKnown RBP13.37□□□□□ -0.27
SNX29P1-201ENST00000548357 MAPK11Q15759 364 aa13.37□□□□□ -0.27
SNX29P1-201ENST00000548357 FBXW9Q5XUX1 488 aa13.37□□□□□ -0.27
SNX29P1-201ENST00000548357 EIF3MQ7L2H7 374 aaKnown RBP13.37□□□□□ -0.27
SNX29P1-201ENST00000548357 WDR31Q8NA23 367 aa13.37□□□□□ -0.27
SNX29P1-201ENST00000548357 ZNF563Q8TA94 476 aa13.37□□□□□ -0.27
SNX29P1-201ENST00000548357 NEURL3Q96EH8 262 aa13.37□□□□□ -0.27
SNX29P1-201ENST00000548357 SLC35A5Q9BS91 424 aa13.37□□□□□ -0.27
SNX29P1-201ENST00000548357 INPP5KQ9BT40 448 aa13.37□□□□□ -0.27
SNX29P1-201ENST00000548357 DPY30Q9C005 99 aa13.37□□□□□ -0.27
SNX29P1-201ENST00000548357 YAE1D1Q9NRH1 226 aa13.37□□□□□ -0.27
SNX29P1-201ENST00000548357 SERINC1Q9NRX5 453 aa13.37□□□□□ -0.27
SNX29P1-201ENST00000548357 PNPOQ9NVS9 261 aa13.37□□□□□ -0.27
SNX29P1-201ENST00000548357 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.37□□□□□ -0.27
SNX29P1-201ENST00000548357 V9GYY5 206 aaPredicted RBP13.37□□□□□ -0.27
SNX29P1-201ENST00000548357 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.37□□□□□ -0.27
SNX29P1-201ENST00000548357 DUXAA6NLW8 204 aa13.36□□□□□ -0.27
SNX29P1-201ENST00000548357 PDLIM1O00151 329 aa13.36□□□□□ -0.27
SNX29P1-201ENST00000548357 LY6HO94772 140 aa13.36□□□□□ -0.27
SNX29P1-201ENST00000548357 SERPINE1P05121 402 aa13.36□□□□□ -0.27
SNX29P1-201ENST00000548357 DHRS4L1P0CG22 281 aa13.36□□□□□ -0.27
SNX29P1-201ENST00000548357 BGNP21810 368 aa13.36□□□□□ -0.27
SNX29P1-201ENST00000548357 APOBEC1P41238 236 aaKnown RBP13.36□□□□□ -0.27
SNX29P1-201ENST00000548357 IDH2P48735 452 aaKnown RBP13.36□□□□□ -0.27
SNX29P1-201ENST00000548357 MAD2L1Q13257 205 aaPredicted RBP13.36□□□□□ -0.27
SNX29P1-201ENST00000548357 PDK3Q15120 406 aa13.36□□□□□ -0.27
SNX29P1-201ENST00000548357 ETFDHQ16134 617 aa13.36□□□□□ -0.27
SNX29P1-201ENST00000548357 GABRA6Q16445 453 aa13.36□□□□□ -0.27
SNX29P1-201ENST00000548357 COX20Q5RI15 118 aa13.36□□□□□ -0.27
SNX29P1-201ENST00000548357 BHLHB9Q6PI77 547 aa13.36□□□□□ -0.27
SNX29P1-201ENST00000548357 RNF130Q86XS8 419 aa13.36□□□□□ -0.27
SNX29P1-201ENST00000548357 UBE2J2Q8N2K1 259 aa13.36□□□□□ -0.27
SNX29P1-201ENST00000548357 TMEM234Q8WY98 164 aa13.36□□□□□ -0.27
SNX29P1-201ENST00000548357 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.36□□□□□ -0.27
SNX29P1-201ENST00000548357 APH1AQ96BI3 265 aa13.36□□□□□ -0.27
SNX29P1-201ENST00000548357 HS6ST2Q96MM7 605 aa13.36□□□□□ -0.27
SNX29P1-201ENST00000548357 NUF2Q9BZD4 464 aa13.36□□□□□ -0.27
SNX29P1-201ENST00000548357 ROPN1BQ9BZX4 212 aaPredicted RBP13.36□□□□□ -0.27
SNX29P1-201ENST00000548357 SLC38A1Q9H2H9 487 aa13.36□□□□□ -0.27
SNX29P1-201ENST00000548357 ROPN1Q9HAT0 212 aaPredicted RBP13.36□□□□□ -0.27
SNX29P1-201ENST00000548357 MARCOQ9UEW3 520 aaPredicted RBP13.36□□□□□ -0.27
SNX29P1-201ENST00000548357 TMED7-TICAM2A0A0A6YYA0 188 aa13.35□□□□□ -0.27
SNX29P1-201ENST00000548357 PRSS51A0A1B0GVH4 220 aa13.35□□□□□ -0.27
SNX29P1-201ENST00000548357 CCT8L1PA6NM43 557 aa13.35□□□□□ -0.27
SNX29P1-201ENST00000548357 M0R1B8 84 aa13.35□□□□□ -0.27
SNX29P1-201ENST00000548357 CD40P25942 277 aa13.35□□□□□ -0.27
SNX29P1-201ENST00000548357 TTKP33981 857 aa13.35□□□□□ -0.27
SNX29P1-201ENST00000548357 KHKP50053 298 aa13.35□□□□□ -0.27
SNX29P1-201ENST00000548357 SLC16A1P53985 500 aa13.35□□□□□ -0.27
SNX29P1-201ENST00000548357 OR2B6P58173 313 aa13.35□□□□□ -0.27
SNX29P1-201ENST00000548357 UFM1P61960 85 aa13.35□□□□□ -0.27
SNX29P1-201ENST00000548357 CSNK2A1P68400 391 aaPredicted RBP13.35□□□□□ -0.27
SNX29P1-201ENST00000548357 KCNJ10P78508 379 aa13.35□□□□□ -0.27
SNX29P1-201ENST00000548357 H3F3AP84243 136 aa13.35□□□□□ -0.27
SNX29P1-201ENST00000548357 SMU1Q2TAY7 513 aa13.35□□□□□ -0.27
SNX29P1-201ENST00000548357 FAM174BQ3ZCQ3 159 aa13.35□□□□□ -0.27
SNX29P1-201ENST00000548357 GPAT3Q53EU6 434 aa13.35□□□□□ -0.27
SNX29P1-201ENST00000548357 AP1ARQ63HQ0 302 aa13.35□□□□□ -0.27
SNX29P1-201ENST00000548357 GRINAQ7Z429 371 aa13.35□□□□□ -0.27
SNX29P1-201ENST00000548357 ZNF525Q8N782 197 aa13.35□□□□□ -0.27
SNX29P1-201ENST00000548357 OR10H5Q8NGA6 315 aa13.35□□□□□ -0.27
SNX29P1-201ENST00000548357 PNPT1Q8TCS8 783 aaKnown RBP13.35□□□□□ -0.27
SNX29P1-201ENST00000548357 SLC25A43Q8WUT9 341 aaPredicted RBP13.35□□□□□ -0.27
SNX29P1-201ENST00000548357 TESCQ96BS2 214 aa13.35□□□□□ -0.27
SNX29P1-201ENST00000548357 MUCL1Q96DR8 90 aa13.35□□□□□ -0.27
SNX29P1-201ENST00000548357 GRIP2Q9C0E4 1043 aa13.35□□□□□ -0.27
SNX29P1-201ENST00000548357 ALG2Q9H553 416 aa13.35□□□□□ -0.27
SNX29P1-201ENST00000548357 SLC7A10Q9NS82 523 aa13.35□□□□□ -0.27
SNX29P1-201ENST00000548357 SLC6A13Q9NSD5 602 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms