RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 TMEM81Q6P7N7 255 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 FAM199XQ6PEV8 388 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-215ENST00000547672 APOOLQ6UXV4 268 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 WDR88Q6ZMY6 472 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 CCDC81Q6ZN84 652 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 GRINAQ7Z429 371 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 PIP4P1Q86T03 277 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 ANKRD13BQ86YJ7 626 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 IQCF1Q8N6M8 205 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 C10orf53Q8N6V4 93 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 GATSQ8NAP1 163 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 OR6S1Q8NH40 331 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 PFN4Q8NHR9 129 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 STK35Q8TDR2 534 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 DUSP19Q8WTR2 217 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 ISOC1Q96CN7 298 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 LMF1Q96S06 567 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 MND1Q9BWT6 205 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 DSN1Q9H410 356 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 GPN2Q9H9Y4 310 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-215ENST00000547672 FGF20Q9NP95 211 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-215ENST00000547672 NANSQ9NR45 359 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 CMC2Q9NRP2 79 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 TCFL5Q9UL49 500 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 DIMT1Q9UNQ2 313 aaKnown RBP12.28□□□□□ -0.44
PTCH1-215ENST00000547672 EXOSC1Q9Y3B2 195 aaKnown RBP12.28□□□□□ -0.44
PTCH1-215ENST00000547672 FER1L5A0AVI2 2057 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 TRAV36DV7A0A075B6V5 113 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 SLC22A31A6NKX4 558 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 PRR23D1E9PI22 279 aaPredicted RBP12.27□□□□□ -0.45
PTCH1-215ENST00000547672 CDK2AP1O14519 115 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 CDC42EP2O14613 210 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 IMPA2O14732 288 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 HPP00738 406 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 UMODP07911 640 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 PRR23D2P0DMB1 279 aaPredicted RBP12.27□□□□□ -0.45
PTCH1-215ENST00000547672 CCNA2P20248 432 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 PSMB9P28065 219 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 TACR3P29371 465 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 HTR1FP30939 366 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 ATP6V1E1P36543 226 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 RNF144AP50876 292 aaPredicted RBP12.27□□□□□ -0.45
PTCH1-215ENST00000547672 NUDT6P53370 316 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 ZNF91Q05481 1191 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 LGALS3BPQ08380 585 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 POU4F2Q12837 409 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 IRF3Q14653 427 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 NTRK2Q16620 822 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 C3orf38Q5JPI3 329 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 SLC30A6Q6NXT4 461 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 RAB43Q86YS6 212 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 PROKR2Q8NFJ6 384 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 OR8D4Q8NGM9 314 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 OR9Q1Q8NGQ5 310 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 GPR119Q8TDV5 335 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 HGDQ93099 445 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 C8orf44Q96CB5 159 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 NMD3Q96D46 503 aaKnown RBP12.27□□□□□ -0.45
PTCH1-215ENST00000547672 SPACA9Q96E40 222 aaPredicted RBP12.27□□□□□ -0.45
PTCH1-215ENST00000547672 COG8Q96MW5 612 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 TNFRSF13CQ96RJ3 184 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 PLA2G12AQ9BZM1 189 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 PTGES2Q9H7Z7 377 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 METTL7AQ9H8H3 244 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 FKRPQ9H9S5 495 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 CPNE5Q9HCH3 593 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 AMBNQ9NP70 447 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 ATP13A2Q9NQ11 1180 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 SERINC1Q9NRX5 453 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 C20orf141Q9NUB4 165 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 TAS2R10Q9NYW0 307 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 DNAJC27Q9NZQ0 273 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 AASSQ9UDR5 926 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 ZNF229Q9UJW7 825 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 HS3ST3B1Q9Y662 390 aa12.27□□□□□ -0.45
PTCH1-215ENST00000547672 IGLV3-32A0A0A0MS00 114 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 A8MVM7 634 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 BHLHE40O14503 412 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 ARPC3O15145 178 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 SLC22A1O15245 554 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 SCO2O43819 266 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 ADAM11O75078 769 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 OR2J2O76002 312 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 INMTO95050 263 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 NADKO95544 446 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-215ENST00000547672 CH25HO95992 272 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 COX6A1P12074 109 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 RPL4P36578 427 aaKnown RBP12.26□□□□□ -0.45
PTCH1-215ENST00000547672 CDH11P55287 796 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 DLX5P56178 289 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 LSM11P83369 360 aaKnown RBP eCLIP12.26□□□□□ -0.45
PTCH1-215ENST00000547672 FOXK2Q01167 660 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 PIGFQ07326 219 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.26□□□□□ -0.45
PTCH1-215ENST00000547672 NDUFAF6Q330K2 333 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 EMC4Q5J8M3 183 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 FAM69BQ5VUD6 431 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 AADACL4Q5VUY2 407 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 JMJD6Q6NYC1 403 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-215ENST00000547672 CBLN3Q6UW01 205 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms