RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 RBBP4Q09028 425 aa10.6□□□□□ -0.71
YBX3-217ENST00000546164 DAZAP2Q15038 168 aaPredicted RBP10.6□□□□□ -0.71
YBX3-217ENST00000546164 ADRM1Q16186 407 aa10.6□□□□□ -0.71
YBX3-217ENST00000546164 ZNF311Q5JNZ3 666 aa10.6□□□□□ -0.71
YBX3-217ENST00000546164 REEP3Q6NUK4 255 aa10.6□□□□□ -0.71
YBX3-217ENST00000546164 PPP4R4Q6NUP7 873 aa10.6□□□□□ -0.71
YBX3-217ENST00000546164 FCRLAQ7L513 359 aa10.6□□□□□ -0.71
YBX3-217ENST00000546164 ZNF550Q7Z398 422 aa10.6□□□□□ -0.71
YBX3-217ENST00000546164 CLIP4Q8N3C7 705 aa10.6□□□□□ -0.71
YBX3-217ENST00000546164 ATP6V1C2Q8NEY4 427 aa10.6□□□□□ -0.71
YBX3-217ENST00000546164 ABHD3Q8WU67 409 aa10.6□□□□□ -0.71
YBX3-217ENST00000546164 ROBO4Q8WZ75 1007 aa10.6□□□□□ -0.71
YBX3-217ENST00000546164 LURAP1Q96LR2 239 aa10.6□□□□□ -0.71
YBX3-217ENST00000546164 OR5B2Q96R09 309 aa10.6□□□□□ -0.71
YBX3-217ENST00000546164 TACO1Q9BSH4 297 aaKnown RBP10.6□□□□□ -0.71
YBX3-217ENST00000546164 ADAM19Q9H013 955 aa10.6□□□□□ -0.71
YBX3-217ENST00000546164 OPN3Q9H1Y3 402 aaPredicted RBP10.6□□□□□ -0.71
YBX3-217ENST00000546164 CTPS2Q9NRF8 586 aa10.6□□□□□ -0.71
YBX3-217ENST00000546164 ELOVL5Q9NYP7 299 aa10.6□□□□□ -0.71
YBX3-217ENST00000546164 KLHL13Q9P2N7 655 aa10.6□□□□□ -0.71
YBX3-217ENST00000546164 OSGIN1Q9UJX0 560 aa10.6□□□□□ -0.71
YBX3-217ENST00000546164 PROCRQ9UNN8 238 aa10.6□□□□□ -0.71
YBX3-217ENST00000546164 HDGFL3Q9Y3E1 203 aa10.6□□□□□ -0.71
YBX3-217ENST00000546164 OTOGQ6ZRI0 2925 aa10.6□□□□□ -0.71
YBX3-217ENST00000546164 TMED7-TICAM2A0A0A6YYA0 188 aa10.59□□□□□ -0.71
YBX3-217ENST00000546164 FBP2O00757 339 aa10.59□□□□□ -0.71
YBX3-217ENST00000546164 SMAD9O15198 467 aaKnown RBP10.59□□□□□ -0.71
YBX3-217ENST00000546164 PRKD3O94806 890 aa10.59□□□□□ -0.71
YBX3-217ENST00000546164 GOSR1O95249 250 aa10.59□□□□□ -0.71
YBX3-217ENST00000546164 NPPAP01160 153 aa10.59□□□□□ -0.71
YBX3-217ENST00000546164 EPXP11678 715 aa10.59□□□□□ -0.71
YBX3-217ENST00000546164 ENPP1P22413 925 aa10.59□□□□□ -0.71
YBX3-217ENST00000546164 TACR3P29371 465 aa10.59□□□□□ -0.71
YBX3-217ENST00000546164 AGTR1P30556 359 aa10.59□□□□□ -0.71
YBX3-217ENST00000546164 CD79BP40259 229 aa10.59□□□□□ -0.71
YBX3-217ENST00000546164 DIO1P49895 249 aa10.59□□□□□ -0.71
YBX3-217ENST00000546164 CSNK2A1P68400 391 aaPredicted RBP10.59□□□□□ -0.71
YBX3-217ENST00000546164 KLF10Q13118 480 aa10.59□□□□□ -0.71
YBX3-217ENST00000546164 SNTB1Q13884 538 aaKnown RBP10.59□□□□□ -0.71
YBX3-217ENST00000546164 NFYCQ13952 458 aa10.59□□□□□ -0.71
YBX3-217ENST00000546164 SCARB2Q14108 478 aa10.59□□□□□ -0.71
YBX3-217ENST00000546164 MAPRE2Q15555 327 aa10.59□□□□□ -0.71
YBX3-217ENST00000546164 TRMT5Q32P41 509 aaKnown RBP10.59□□□□□ -0.71
YBX3-217ENST00000546164 DHRS4L2Q6PKH6 230 aa10.59□□□□□ -0.71
YBX3-217ENST00000546164 NET1Q7Z628 596 aaPredicted RBP10.59□□□□□ -0.71
YBX3-217ENST00000546164 KRT73Q86Y46 540 aa10.59□□□□□ -0.71
YBX3-217ENST00000546164 ZZZ3Q8IYH5 903 aa10.59□□□□□ -0.71
YBX3-217ENST00000546164 HIPK4Q8NE63 616 aa10.59□□□□□ -0.71
YBX3-217ENST00000546164 NFKBIDQ8NI38 313 aa10.59□□□□□ -0.71
YBX3-217ENST00000546164 C10orf82Q8WW14 230 aa10.59□□□□□ -0.71
YBX3-217ENST00000546164 DACH2Q96NX9 599 aa10.59□□□□□ -0.71
YBX3-217ENST00000546164 SLC39A3Q9BRY0 314 aa10.59□□□□□ -0.71
YBX3-217ENST00000546164 SPATA5L1Q9BVQ7 753 aa10.59□□□□□ -0.71
YBX3-217ENST00000546164 RSPO3Q9BXY4 272 aaPredicted RBP10.59□□□□□ -0.71
YBX3-217ENST00000546164 KAT8Q9H7Z6 458 aaKnown RBP10.59□□□□□ -0.71
YBX3-217ENST00000546164 BCO1Q9HAY6 547 aa10.59□□□□□ -0.71
YBX3-217ENST00000546164 KLHL9Q9P2J3 617 aa10.59□□□□□ -0.71
YBX3-217ENST00000546164 ING1Q9UK53 422 aaPredicted RBP10.59□□□□□ -0.71
YBX3-217ENST00000546164 CLEC4AQ9UMR7 237 aa10.59□□□□□ -0.71
YBX3-217ENST00000546164 TRAPPC4Q9Y296 219 aa10.59□□□□□ -0.71
YBX3-217ENST00000546164 TMED7Q9Y3B3 224 aa10.59□□□□□ -0.71
YBX3-217ENST00000546164 ANKRD17O75179 2603 aaKnown RBP10.58□□□□□ -0.72
YBX3-217ENST00000546164 MPDZO75970 2070 aa10.58□□□□□ -0.72
YBX3-217ENST00000546164 BBIP1A8MTZ0 92 aa10.58□□□□□ -0.72
YBX3-217ENST00000546164 SULT2B1O00204 365 aa10.58□□□□□ -0.72
YBX3-217ENST00000546164 CYTIPO60759 359 aa10.58□□□□□ -0.72
YBX3-217ENST00000546164 CTAG2O75638 210 aa10.58□□□□□ -0.72
YBX3-217ENST00000546164 PMS2P2O95744 297 aa10.58□□□□□ -0.72
YBX3-217ENST00000546164 GKN3PP0CG01 181 aa10.58□□□□□ -0.72
YBX3-217ENST00000546164 PRG2P13727 222 aa10.58□□□□□ -0.72
YBX3-217ENST00000546164 SLC6A2P23975 617 aa10.58□□□□□ -0.72
YBX3-217ENST00000546164 CPOXP36551 454 aa10.58□□□□□ -0.72
YBX3-217ENST00000546164 PCBP3P57721 371 aaKnown RBP10.58□□□□□ -0.72
YBX3-217ENST00000546164 MTPNP58546 118 aa10.58□□□□□ -0.72
YBX3-217ENST00000546164 KRTAP10-9P60411 292 aa10.58□□□□□ -0.72
YBX3-217ENST00000546164 COPZ1P61923 177 aa10.58□□□□□ -0.72
YBX3-217ENST00000546164 FAM27E3Q08E93 113 aa10.58□□□□□ -0.72
YBX3-217ENST00000546164 PDK3Q15120 406 aa10.58□□□□□ -0.72
YBX3-217ENST00000546164 TMEM201Q5SNT2 666 aa10.58□□□□□ -0.72
YBX3-217ENST00000546164 WBP2NLQ6ICG8 309 aa10.58□□□□□ -0.72
YBX3-217ENST00000546164 SERPINA11Q86U17 422 aa10.58□□□□□ -0.72
YBX3-217ENST00000546164 PTOV1Q86YD1 416 aa10.58□□□□□ -0.72
YBX3-217ENST00000546164 ZNF610Q8N9Z0 462 aa10.58□□□□□ -0.72
YBX3-217ENST00000546164 C11orf65Q8NCR3 313 aa10.58□□□□□ -0.72
YBX3-217ENST00000546164 BHLHE22Q8NFJ8 381 aaPredicted RBP10.58□□□□□ -0.72
YBX3-217ENST00000546164 ARL5BQ96KC2 179 aa10.58□□□□□ -0.72
YBX3-217ENST00000546164 PSD2Q9BQI7 771 aa10.58□□□□□ -0.72
YBX3-217ENST00000546164 AKAP6Q13023 2319 aa10.58□□□□□ -0.72
YBX3-217ENST00000546164 HRNRQ86YZ3 2850 aaPredicted RBP10.57□□□□□ -0.72
YBX3-217ENST00000546164 IGKV3D-15A0A087WSY6 115 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 TMEM72A0PK05 275 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 PRORSD1PA6NEY8 169 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 A6NNC1 897 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 ZNF724A8MTY0 619 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 FXYD1O00168 92 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 SERPINB7O75635 380 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 FESP07332 822 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 YES1P07947 543 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 TFPIP10646 304 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 POU2F1P14859 743 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms