RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 MT-ND4P03905 459 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 ADRB1P08588 477 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 PEPDP12955 493 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 HIST1H1CP16403 213 aaKnown RBP14.56□□□□□ -0.08
LDLR-204ENST00000545707 NDUFAF6Q330K2 333 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 PYHIN1Q6K0P9 492 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 TPRA1Q86W33 373 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 ZNF761Q86XN6 746 aaPredicted RBP14.56□□□□□ -0.08
LDLR-204ENST00000545707 FRMD1Q8N878 549 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 SCARF2Q96GP6 870 aaPredicted RBP14.56□□□□□ -0.08
LDLR-204ENST00000545707 HYLS1Q96M11 299 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 OR14A2Q96R54 314 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 ACTR10Q9NZ32 417 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 IDSB3KWA1 339 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 CYR61O00622 381 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 BRINP1O60477 761 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 GPR75O95800 540 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 DRD5P21918 477 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 UQCRC1P31930 480 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 OR3A3P47888 321 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 P2RX3P56373 397 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 NRG3P56975 720 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 PPP1CAP62136 330 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 FAM53BQ14153 422 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 CEP78Q5JTW2 689 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 CREB3L2Q70SY1 520 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 ABHD13Q7L211 337 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 ZNF687Q8N1G0 1237 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 OR52R1Q8NGF1 315 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 ZNF431Q8TF32 576 aaPredicted RBP14.56□□□□□ -0.08
LDLR-204ENST00000545707 PELI1Q96FA3 418 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 SCMH1Q96GD3 660 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 CACNG6Q9BXT2 260 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 DPAGT1Q9H3H5 408 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 ZFP64Q9NPA5 681 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 TMEM5Q9Y2B1 443 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 A0A087WV48 116 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 A0A0B4J2E0 115 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 A0A1B0GX12 115 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 OR2W5A6NFC9 320 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 HRKO00198 91 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 SERPINI2O75830 405 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 IGKV1D-16P01601 117 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 ATP1B1P05026 303 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 POU2F2P09086 479 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 EPXP11678 715 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 GDI2P50395 445 aaKnown RBP14.55□□□□□ -0.08
LDLR-204ENST00000545707 NNATQ16517 81 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 ALG10BQ5I7T1 473 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 OR6C4Q8NGE1 309 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 SLC22A18Q96BI1 424 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 DERL3Q96Q80 235 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 C1QTNF7Q9BXJ2 289 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 AUNIPQ9H7T9 357 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 INPP5EQ9NRR6 644 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 NKIRAS2Q9NYR9 191 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 IER3IP1Q9Y5U9 82 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 MYO9BQ13459 2157 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 TRIOO75962 3097 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 STOMP27105 288 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 GRPRP30550 384 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 EXOSC6Q5RKV6 272 aaKnown RBP14.55□□□□□ -0.08
LDLR-204ENST00000545707 RTL4Q6ZR62 310 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 CAMKVQ8NCB2 501 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 ZPLD1Q8TCW7 415 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 PCNPQ8WW12 178 aaKnown RBP14.55□□□□□ -0.08
LDLR-204ENST00000545707 BMFQ96LC9 184 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 MYADMQ96S97 322 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 ZFYVE21Q9BQ24 234 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 OR51J1Q9H342 316 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 SFXN1Q9H9B4 322 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 TRPV4Q9HBA0 871 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 GNG8Q9UK08 70 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 SATB2Q9UPW6 733 aa14.55□□□□□ -0.08
LDLR-204ENST00000545707 ARHGEF17Q96PE2 2063 aaPredicted RBP14.54□□□□□ -0.08
LDLR-204ENST00000545707 URADA6NGE7 173 aa14.54□□□□□ -0.08
LDLR-204ENST00000545707 C4orf47A7E2U8 309 aa14.54□□□□□ -0.08
LDLR-204ENST00000545707 FAM171A2A8MVW0 826 aa14.54□□□□□ -0.08
LDLR-204ENST00000545707 MCIDASD6RGH6 385 aa14.54□□□□□ -0.08
LDLR-204ENST00000545707 PRKNO60260 465 aaPredicted RBP14.54□□□□□ -0.08
LDLR-204ENST00000545707 CBX7O95931 251 aa14.54□□□□□ -0.08
LDLR-204ENST00000545707 WNT1P04628 370 aa14.54□□□□□ -0.08
LDLR-204ENST00000545707 ACAA2P42765 397 aaKnown RBP14.54□□□□□ -0.08
LDLR-204ENST00000545707 KIR2DS3Q14952 304 aa14.54□□□□□ -0.08
LDLR-204ENST00000545707 DEFB110Q30KQ9 67 aa14.54□□□□□ -0.08
LDLR-204ENST00000545707 FAM209AQ5JX71 171 aa14.54□□□□□ -0.08
LDLR-204ENST00000545707 RPL13AP3Q6NVV1 102 aa14.54□□□□□ -0.08
LDLR-204ENST00000545707 OR51Q1Q8NH59 317 aa14.54□□□□□ -0.08
LDLR-204ENST00000545707 RERGQ96A58 199 aaPredicted RBP14.54□□□□□ -0.08
LDLR-204ENST00000545707 GPR174Q9BXC1 333 aa14.54□□□□□ -0.08
LDLR-204ENST00000545707 C7orf66A4D0T2 115 aa14.54□□□□□ -0.08
LDLR-204ENST00000545707 CDC123O75794 336 aaPredicted RBP14.54□□□□□ -0.08
LDLR-204ENST00000545707 VSX2P58304 361 aaPredicted RBP14.54□□□□□ -0.08
LDLR-204ENST00000545707 TAS2R43P59537 309 aa14.54□□□□□ -0.08
LDLR-204ENST00000545707 RPS11P62280 158 aaKnown RBP eCLIP14.54□□□□□ -0.08
LDLR-204ENST00000545707 SLC25A18Q9H1K4 315 aa14.54□□□□□ -0.08
LDLR-204ENST00000545707 CDCP1Q9H5V8 836 aa14.54□□□□□ -0.08
LDLR-204ENST00000545707 ZNF346Q9UL40 294 aaKnown RBP14.54□□□□□ -0.08
LDLR-204ENST00000545707 ING4Q9UNL4 249 aa14.54□□□□□ -0.08
LDLR-204ENST00000545707 COPS3Q9UNS2 423 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms