RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 RNF145Q96MT1 663 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 CCDC115Q96NT0 180 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 DACH2Q96NX9 599 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 SDF2Q99470 211 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 POLDIP3Q9BY77 421 aaKnown RBP6.88□□□□□ -1.31
SNHG1-223ENST00000545440 ZNF350Q9GZX5 532 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 POLE3Q9NRF9 147 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 RASSF1Q9NS23 344 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 EXD2Q9NVH0 621 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 MARCOQ9UEW3 520 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-223ENST00000545440 BTNL2Q9UIR0 455 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 DTNAQ9Y4J8 743 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 KCNE3Q9Y6H6 103 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 CELSR1Q9NYQ6 3014 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 TEP1Q99973 2627 aaKnown RBP6.88□□□□□ -1.31
SNHG1-223ENST00000545440 ARID1AO14497 2285 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 NPIPA5A0A0B4J1W7 369 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 GJE1A6NN92 205 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 NPIPA7E9PJI5 369 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 ETV2O00321 342 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-223ENST00000545440 ZNF264O43296 627 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 KIAA0513O60268 411 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 AQP8O94778 261 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 NTN1O95631 604 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 NUDT14O95848 222 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 NPIPA8P0DM63 369 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 UBL4AP11441 157 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 IDO1P14902 403 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 EPHA3P29320 983 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 TXNL4AP83876 142 aaKnown RBP6.87□□□□□ -1.31
SNHG1-223ENST00000545440 FOXF1Q12946 379 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 SELENBP1Q13228 472 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 SKP2Q13309 424 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 ZNF141Q15928 474 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 SGCBQ16585 318 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 PDSS1Q5T2R2 415 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 PDZK1Q5T2W1 519 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 ATAD3BQ5T9A4 648 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 AGBL2Q5U5Z8 902 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 AP1ARQ63HQ0 302 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 VWA1Q6PCB0 445 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 CBLN3Q6UW01 205 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 SPNS3Q6ZMD2 512 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 C16orf62Q7Z3J2 963 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 CLEC4FQ8N1N0 589 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 TRIML2Q8N7C3 387 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 ZNF614Q8N883 585 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 GLB1L3Q8NCI6 653 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-223ENST00000545440 FAM71CQ8NEG0 241 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 OR10D3Q8NH80 312 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 OR2V1Q8NHB1 315 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 POC1BQ8TC44 478 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 ZBTB9Q96C00 473 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 STARD4Q96DR4 205 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 ARSGQ96EG1 525 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 GMPPAQ96IJ6 420 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-223ENST00000545440 MRGPRX4Q96LA9 322 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 TEX37Q96LM6 180 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 KLHL15Q96M94 604 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 NPAS1Q99742 590 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 GPATCH1Q9BRR8 931 aaKnown RBP6.87□□□□□ -1.31
SNHG1-223ENST00000545440 SLC35A5Q9BS91 424 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 OR51I1Q9H343 314 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 HEATR1Q9H583 2144 aaKnown RBP6.87□□□□□ -1.31
SNHG1-223ENST00000545440 MANSC1Q9H8J5 431 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 GLRX2Q9NS18 164 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 ELOVL5Q9NYP7 299 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 MCTS1Q9ULC4 181 aaKnown RBP6.87□□□□□ -1.31
SNHG1-223ENST00000545440 TESMINQ9Y4I5 508 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 GPR45Q9Y5Y3 372 aa6.87□□□□□ -1.31
SNHG1-223ENST00000545440 GOLGA8QA0A0J9YX86 632 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 SH3D21A4FU49 640 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 GOLGA8OA6NCC3 632 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 ZNF503-AS2A6NEH8 195 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 SERINC4A6NH21 518 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 GOLGA8NF8WBI6 632 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 TNFSF11O14788 317 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 EIF4E2O60573 245 aaKnown RBP6.86□□□□□ -1.31
SNHG1-223ENST00000545440 SS18L1O75177 396 aaPredicted RBP6.86□□□□□ -1.31
SNHG1-223ENST00000545440 UGT2B17O75795 530 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 APOL3O95236 402 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 SYNGR4O95473 234 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 CPSF4O95639 269 aaKnown RBP6.86□□□□□ -1.31
SNHG1-223ENST00000545440 CGAP01215 116 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 PABPC4LP0CB38 370 aaKnown RBP6.86□□□□□ -1.31
SNHG1-223ENST00000545440 CCKARP32238 428 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 CHI3L1P36222 383 aaPredicted RBP6.86□□□□□ -1.31
SNHG1-223ENST00000545440 CD79BP40259 229 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 MAGEA8P43361 318 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 ANXA11P50995 505 aaKnown RBP6.86□□□□□ -1.31
SNHG1-223ENST00000545440 CCR4P51679 360 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 UFM1P61960 85 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 SIRPAP78324 504 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 HPCAP84074 193 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 FUT5Q11128 374 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 CBFBQ13951 182 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 GPR68Q15743 365 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 ZNF239Q16600 458 aaKnown RBP6.86□□□□□ -1.31
SNHG1-223ENST00000545440 GSTA3Q16772 222 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 PDCD4Q53EL6 469 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms