RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 GTF2H4Q92759 462 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 RNASE6Q93091 150 aaKnown RBP6.62□□□□□ -1.35
CPSF7-224ENST00000544990 VPS33AQ96AX1 596 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 SPDL1Q96EA4 605 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 REXO5Q96IC2 774 aaKnown RBP6.62□□□□□ -1.35
CPSF7-224ENST00000544990 KLHL15Q96M94 604 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 TREX2Q9BQ50 279 aaPredicted RBP6.62□□□□□ -1.35
CPSF7-224ENST00000544990 ZNF559Q9BR84 538 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 THUMPD3Q9BV44 507 aaKnown RBP6.62□□□□□ -1.35
CPSF7-224ENST00000544990 CACYBPQ9HB71 228 aaKnown RBP6.62□□□□□ -1.35
CPSF7-224ENST00000544990 SERINC1Q9NRX5 453 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 MRGBPQ9NV56 204 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 P2RX2Q9UBL9 471 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 KCNN3Q9UGI6 736 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 KCNE5Q9UJ90 142 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 MCTS1Q9ULC4 181 aaKnown RBP6.62□□□□□ -1.35
CPSF7-224ENST00000544990 UNC79Q9P2D8 2635 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 A0A096LPI6 279 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 A0A0G2JND7 137 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 A0A1W2PNV4 684 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 AGAP5A6NIR3 686 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 H0YC42 278 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 CLIC1O00299 241 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 NR5A2O00482 541 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 TNFSF11O14788 317 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 ADAMDEC1O15204 470 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 ATP8B1O43520 1251 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 CXCL13O43927 109 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 PLGP00747 810 aaPredicted RBP6.61□□□□□ -1.35
CPSF7-224ENST00000544990 OPN1LWP04000 364 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 DBIP07108 87 aaKnown RBP6.61□□□□□ -1.35
CPSF7-224ENST00000544990 PABPC4LP0CB38 370 aaKnown RBP6.61□□□□□ -1.35
CPSF7-224ENST00000544990 TROVE2P10155 538 aaKnown RBP eCLIP6.61□□□□□ -1.35
CPSF7-224ENST00000544990 ETFAP13804 333 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 PRF1P14222 555 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 PRKCAP17252 672 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 PPIBP23284 216 aaKnown RBP6.61□□□□□ -1.35
CPSF7-224ENST00000544990 PSMA4P25789 261 aaKnown RBP6.61□□□□□ -1.35
CPSF7-224ENST00000544990 FKBP2P26885 142 aaKnown RBP6.61□□□□□ -1.35
CPSF7-224ENST00000544990 SFTPDP35247 375 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 PGM1P36871 562 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 KIR2DL3P43628 341 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 SLC6A8P48029 635 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 CPA2P48052 419 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 CRISP3P54108 245 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 TPD52P55327 224 aaPredicted RBP6.61□□□□□ -1.35
CPSF7-224ENST00000544990 CARD18P57730 90 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 TLE4Q04727 773 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 FUT5Q11128 374 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 FOXF1Q12946 379 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 FOXF2Q12947 444 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 FADDQ13158 208 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 MYBPHQ13203 477 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 SELENBP1Q13228 472 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 SKP2Q13309 424 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 QPRTQ15274 297 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 TOMM34Q15785 309 aaPredicted RBP6.61□□□□□ -1.35
CPSF7-224ENST00000544990 MAPK14Q16539 360 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 ZSWIM7Q19AV6 140 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 NDUFAF6Q330K2 333 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 TMEM176BQ3YBM2 270 aaPredicted RBP6.61□□□□□ -1.35
CPSF7-224ENST00000544990 SLC25A53Q5H9E4 307 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 METTL21CQ5VZV1 264 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 SLC2A7Q6PXP3 512 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 PLXDC2Q6UX71 529 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 OLIG3Q7RTU3 272 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 GGNQ86UU5 652 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 FUNDC1Q8IVP5 155 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 ANKFN1Q8N957 763 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 CNEP1R1Q8N9A8 125 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 FNDC9Q8TBE3 224 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 POC1BQ8TC44 478 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 WDR60Q8WVS4 1066 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 FIG4Q92562 907 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 OSTF1Q92882 214 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 ZG16BQ96DA0 208 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 THOC1Q96FV9 657 aaKnown RBP6.61□□□□□ -1.35
CPSF7-224ENST00000544990 ZNF845Q96IR2 970 aaPredicted RBP6.61□□□□□ -1.35
CPSF7-224ENST00000544990 NPAS1Q99742 590 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 RBM24Q9BX46 236 aaKnown RBP6.61□□□□□ -1.35
CPSF7-224ENST00000544990 TRIM8Q9BZR9 551 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 PAIP1Q9H074 479 aaKnown RBP6.61□□□□□ -1.35
CPSF7-224ENST00000544990 SLC38A1Q9H2H9 487 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 ARMC7Q9H6L4 198 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 TMEM185BQ9H7F4 350 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 RNF122Q9H9V4 155 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 MCCC2Q9HCC0 563 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 MED4Q9NPJ6 270 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 EXOSC3Q9NQT5 275 aaKnown RBP6.61□□□□□ -1.35
CPSF7-224ENST00000544990 GLRX2Q9NS18 164 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 SLC6A13Q9NSD5 602 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 ZNF446Q9NWS9 450 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 JKAMPQ9P055 326 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 PRDM4Q9UKN5 801 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 PACSIN3Q9UKS6 424 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 CORO2BQ9UQ03 480 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 L3MBTL1Q9Y468 752 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 SPIN1Q9Y657 262 aaPredicted RBP6.61□□□□□ -1.35
CPSF7-224ENST00000544990 U3KQE9 123 aa6.61□□□□□ -1.35
CPSF7-224ENST00000544990 CREBBPQ92793 2442 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms