RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 IGHA2P01877 340 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 POU2F2P09086 479 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 UBL4AP11441 157 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 FUT1P19526 365 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 PTBP1P26599 531 aaKnown RBP eCLIP5.38□□□□□ -1.556e-18■■■■■ 65.1
VPS50-220ENST00000544910 EIF1AXP47813 144 aaKnown RBP5.38□□□□□ -1.55
VPS50-220ENST00000544910 GPR18Q14330 331 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 CCDC58Q4VC31 144 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 ALG10Q5BKT4 473 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 BCL2L15Q5TBC7 163 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 SLC43A2Q8N370 569 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 C19orf47Q8N9M1 422 aaKnown RBP5.38□□□□□ -1.55
VPS50-220ENST00000544910 SSX3Q99909 188 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 CCDC86Q9H6F5 360 aaKnown RBP5.38□□□□□ -1.55
VPS50-220ENST00000544910 NANSQ9NR45 359 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 SPHK1Q9NYA1 384 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 CXXC1Q9P0U4 656 aaPredicted RBP5.38□□□□□ -1.55
VPS50-220ENST00000544910 FAM221BA6H8Z2 402 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 C17orf105B2RV13 164 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 SGCEO43556 437 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 ALX3O95076 343 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 SNRPD2P62316 118 aaKnown RBP5.37□□□□□ -1.55
VPS50-220ENST00000544910 FOXK2Q01167 660 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 SERTAD2Q14140 314 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 ABCA11PQ4W5N1 156 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 MANEAQ5SRI9 462 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 HES5Q5TA89 166 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 METTL11BQ5VVY1 283 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 ACSM5Q6NUN0 579 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 FAM111BQ6SJ93 734 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 PAQR6Q6TCH4 344 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 NKAIN4Q8IVV8 208 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 MFSD4AQ8N468 514 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 TP53I13Q8NBR0 393 aaPredicted RBP5.37□□□□□ -1.55
VPS50-220ENST00000544910 FAM3CQ92520 227 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 RELTQ969Z4 430 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 CACNG6Q9BXT2 260 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.37□□□□□ -1.55
VPS50-220ENST00000544910 SERINC1Q9NRX5 453 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 TAS2R8Q9NYW2 309 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 DHDHQ9UQ10 334 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 SLC17A4Q9Y2C5 497 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 TMEM14AQ9Y6G1 99 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 SURF4O15260 269 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 ZNF217O75362 1048 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 RBBP9O75884 186 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 PROS1P07225 676 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 PGAM2P15259 253 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 RPS2P15880 293 aaKnown RBP5.37□□□□□ -1.55
VPS50-220ENST00000544910 TEAD1P28347 426 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 NUDT1P36639 197 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 SLC6A8P48029 635 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 SOX2P48431 317 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 ZNF41P51814 821 aaPredicted RBP5.37□□□□□ -1.55
VPS50-220ENST00000544910 LBX1P52954 281 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 ART1P52961 327 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 PCBP3P57721 371 aaKnown RBP5.37□□□□□ -1.55
VPS50-220ENST00000544910 DEFA6Q01524 100 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 CBFBQ13951 182 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 ZMYND11Q15326 602 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 ZNF322Q6U7Q0 402 aaPredicted RBP5.37□□□□□ -1.55
VPS50-220ENST00000544910 PARM1Q6UWI2 310 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 SSX6Q7RTT6 188 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 GALNTL5Q7Z4T8 443 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 BTLAQ7Z6A9 289 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 ADGRF3Q8IZF5 1079 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 HAVCR2Q8TDQ0 301 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 NKD1Q969G9 470 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 CCDC120Q96HB5 630 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 ZNF416Q9BWM5 594 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 POTEKPQ9BYX7 375 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 CRISPLD2Q9H0B8 497 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 ZNF700Q9H0M5 742 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 C11orf54Q9H0W9 315 aaPredicted RBP5.37□□□□□ -1.55
VPS50-220ENST00000544910 SRA1Q9HD15 236 aaKnown RBP5.37□□□□□ -1.55
VPS50-220ENST00000544910 SDHAF3Q9NRP4 125 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 ASB6Q9NWX5 421 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 KLRF1Q9NZS2 232 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 KCMF1Q9P0J7 381 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 KLHL9Q9P2J3 617 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 POLHQ9Y253 713 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 RASD1Q9Y272 281 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 RBM7Q9Y580 266 aaKnown RBP5.37□□□□□ -1.55
VPS50-220ENST00000544910 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 LOC102723532A0A0G2JNH3 316 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 TEX13CA0A0J9YWL9 993 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 SLC9B1P1A6NJY1 282 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 F8W036 122 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 PSMD9O00233 223 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 DUX1O43812 170 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 IFNA2P01563 188 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 GYPBP06028 91 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 HEXBP07686 556 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 THBS1P07996 1170 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 TRAPPC2P0DI81 140 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 TRAPPC2BP0DI82 140 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 SPNP16150 400 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 TGM1P22735 817 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 HSD11B1P28845 292 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 DDOSTP39656 456 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms