RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	HELT	A6NFD8	242 aa		2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	TRIM49D1	C9J1S8	452 aa		2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	CXCL13	O43927	109 aa		2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	IGHG4	P01861	327 aa		2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	NR2C1	P13056	603 aa		2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	RPA2	P15927	270 aa		2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	ZNF17	P17021	662 aa		2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	CCNE1	P24864	410 aa		2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	HTR1E	P28566	365 aa		2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	PTGDS	P41222	190 aa		2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	NUP107	P57740	925 aa		2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	RPS14	P62263	151 aa	Known RBP	2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	CSNK1G2	P78368	415 aa		2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	CBX1	P83916	185 aa		2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	CAPRIN1	Q14444	709 aa	Known RBP	2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	MESD	Q14696	234 aa		2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	ARL6IP1	Q15041	203 aa		2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	SLC38A6	Q8IZM9	456 aa		2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	RNF175	Q8N4F7	328 aa		2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	TEX9	Q8N6V9	391 aa		2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	ATP6V0D2	Q8N8Y2	350 aa		2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	DCAF4L2	Q8NA75	395 aa		2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	C20orf203	Q8NBC4	194 aa		2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	ZNF740	Q8NDX6	193 aa		2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	RAPGEF5	Q92565	580 aa		2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	ZNF799	Q96GE5	643 aa		2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	SENP8	Q96LD8	212 aa		2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	TUBGCP2	Q9BSJ2	902 aa		2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	RMND5A	Q9H871	391 aa		2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	NANOG	Q9H9S0	305 aa		2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	RNF14	Q9UBS8	474 aa		2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	ISY1	Q9ULR0	285 aa	Known RBP	2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	SLCO1B1	Q9Y6L6	691 aa		2.79	□□□□□ -1.96
RAP1B-231	ENST00000544639	KDR	P35968	1356 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	CLSPN	Q9HAW4	1339 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	LRP5L	A4QPB2	252 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	TRDC	B7Z8K6	153 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	OR10H3	O60404	316 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	N4BP1	O75113	896 aa	Known RBP	2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	NPIPB7	O75200	414 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	LGI1	O95970	557 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	LGALS2	P05162	132 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	UGT2B4	P06133	528 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	PTMA	P06454	111 aa	Known RBP	2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	ALOX5	P09917	674 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	RBMY1C	P0DJD4	496 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	POLR2E	P19388	210 aa	Known RBP	2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	MDK	P21741	143 aa	Predicted RBP	2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	PSMA5	P28066	241 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	LAP3	P28838	519 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	OTX2	P32243	289 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	C1orf61	Q13536	156 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	NSUN5P1	Q3KNT7	163 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	C10orf120	Q5SQS8	335 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	GPRC6A	Q5T6X5	926 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	C1orf146	Q5VVC0	180 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	TPGS2	Q68CL5	300 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	IGFL2	Q6UWQ7	119 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639		Q6ZVH6	145 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	GET4	Q7L5D6	327 aa	Predicted RBP	2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	ZNF683	Q8IZ20	524 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	OR2L13	Q8N349	312 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	ANKFN1	Q8N957	763 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	OR4D5	Q8NGN0	318 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	FBXO30	Q8TB52	745 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	UBE2Q2	Q8WVN8	375 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	ST8SIA1	Q92185	356 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	LINC00167	Q96N53	147 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	TGM7	Q96PF1	710 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	POLR2J2	Q9GZM3	115 aa	Known RBP	2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	POLR2J3	Q9H1A7	115 aa	Known RBP	2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	RAB18	Q9NP72	206 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	AATF	Q9NY61	560 aa	Known RBP eCLIP	2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	TREM2	Q9NZC2	230 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	PIPOX	Q9P0Z9	390 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	CGN	Q9P2M7	1197 aa	Known RBP	2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	RPH3AL	Q9UNE2	315 aa		2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	MRPS33	Q9Y291	106 aa	Known RBP	2.78	□□□□□ -1.96
RAP1B-231	ENST00000544639	IGHV3OR16-13	A0A075B7E8	117 aa		2.77	□□□□□ -1.97
RAP1B-231	ENST00000544639		A0A1B0GUS0	222 aa		2.77	□□□□□ -1.97
RAP1B-231	ENST00000544639		A8MUA0	341 aa		2.77	□□□□□ -1.97
RAP1B-231	ENST00000544639		K7EQM0	130 aa		2.77	□□□□□ -1.97
RAP1B-231	ENST00000544639	NDC80	O14777	642 aa		2.77	□□□□□ -1.97
RAP1B-231	ENST00000544639	KIAA0754	O94854	1291 aa		2.77	□□□□□ -1.97
RAP1B-231	ENST00000544639	PNMT	P11086	282 aa		2.77	□□□□□ -1.97
RAP1B-231	ENST00000544639	HNF1A	P20823	631 aa		2.77	□□□□□ -1.97
RAP1B-231	ENST00000544639	HTR1F	P30939	366 aa		2.77	□□□□□ -1.97
RAP1B-231	ENST00000544639	TDO2	P48775	406 aa		2.77	□□□□□ -1.97
RAP1B-231	ENST00000544639	KLK7	P49862	253 aa		2.77	□□□□□ -1.97
RAP1B-231	ENST00000544639	RIPK1	Q13546	671 aa		2.77	□□□□□ -1.97
RAP1B-231	ENST00000544639	NSDHL	Q15738	373 aa		2.77	□□□□□ -1.97
RAP1B-231	ENST00000544639	ZNF658B	Q4V348	819 aa	Predicted RBP	2.77	□□□□□ -1.97
RAP1B-231	ENST00000544639	DNAJC21	Q5F1R6	531 aa	Known RBP	2.77	□□□□□ -1.97
RAP1B-231	ENST00000544639	CASC10	Q5T4H9	136 aa		2.77	□□□□□ -1.97
RAP1B-231	ENST00000544639	BEND3	Q5T5X7	828 aa		2.77	□□□□□ -1.97
RAP1B-231	ENST00000544639	NKAPP1	Q8N9T2	125 aa		2.77	□□□□□ -1.97
RAP1B-231	ENST00000544639	SUMF2	Q8NBJ7	301 aa		2.77	□□□□□ -1.97
RAP1B-231	ENST00000544639	HTR3C	Q8WXA8	447 aa		2.77	□□□□□ -1.97
RAP1B-231	ENST00000544639	MYDGF	Q969H8	173 aa		2.77	□□□□□ -1.97
RAP1B-231	ENST00000544639	RPUSD4	Q96CM3	377 aa	Known RBP	2.77	□□□□□ -1.97

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms