RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 DCAF13Q9NV06 445 aaKnown RBP5.69□□□□□ -1.5
LTBR-212ENST00000543542 PAQR5Q9NXK6 330 aaPredicted RBP5.69□□□□□ -1.5
LTBR-212ENST00000543542 COQ3Q9NZJ6 369 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.69□□□□□ -1.5
LTBR-212ENST00000543542 C6orf203Q9P0P8 240 aaPredicted RBP5.69□□□□□ -1.5
LTBR-212ENST00000543542 OSGIN1Q9UJX0 560 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 PRDM4Q9UKN5 801 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 MEMO1Q9Y316 297 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 CHST2Q9Y4C5 530 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 ATRXP46100 2492 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 HEATR5AQ86XA9 2040 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 A0A0J9YW62 118 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 TRAPPC13A5PLN9 417 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 SLC22A20A6NK97 555 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 A8MVM7 634 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 E9PLN8 166 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 H0YC42 278 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 hCG_2039718K7EN88 272 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 SULT2B1O00204 365 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 GSC2O15499 205 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 ZNF208O43345 1280 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 TPST2O60704 377 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 FMO6PO60774 539 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 PRKD3O94806 890 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 AHSA1O95433 338 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 NTN1O95631 604 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 EPPINO95925 133 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 FABP3P05413 133 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 FCGR2AP12318 317 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 ITGA2P17301 1181 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 PTNP21246 168 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 ENPP1P22413 925 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 PSMA4P25789 261 aaKnown RBP5.68□□□□□ -1.5
LTBR-212ENST00000543542 HTR2AP28223 471 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 IDUAP35475 653 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 MAP2K6P52564 334 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 ZNF136P52737 540 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 SUCLG1P53597 346 aaKnown RBP5.68□□□□□ -1.5
LTBR-212ENST00000543542 CRYBA2P53672 197 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 CDH12P55289 794 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 TPD52P55327 224 aaPredicted RBP5.68□□□□□ -1.5
LTBR-212ENST00000543542 NUP107P57740 925 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 IL1RL1Q01638 556 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 FLOT2Q14254 428 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 PON3Q15166 354 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 TMEM44Q2T9K0 475 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 ACSF3Q4G176 576 aaPredicted RBP5.68□□□□□ -1.5
LTBR-212ENST00000543542 MTX3Q5HYI7 312 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 EMC4Q5J8M3 183 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 NSUN5P2Q63ZY6 315 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 GTF2IRD2BQ6EKJ0 949 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 ZNF613Q6PF04 617 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 PLXDC2Q6UX71 529 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 NCCRP1Q6ZVX7 275 aaPredicted RBP5.68□□□□□ -1.5
LTBR-212ENST00000543542 RRM2BQ7LG56 351 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 GTF2IRD2Q86UP8 949 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 GGNQ86UU5 652 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 COMTD1Q86VU5 262 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 SPATA24Q86W54 205 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 ADGRG3Q86Y34 549 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 CHERPQ8IWX8 916 aaKnown RBP5.68□□□□□ -1.5
LTBR-212ENST00000543542 LSMEM1Q8N8F7 131 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 OR4D11Q8NGI4 311 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 OR10D3Q8NH80 312 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 ADAMTS16Q8TE57 1224 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 RND1Q92730 232 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 SLC38A4Q969I6 547 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 CPNE4Q96A23 557 aaPredicted RBP5.68□□□□□ -1.5
LTBR-212ENST00000543542 C3orf49Q96BT1 292 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 ZNF524Q96C55 264 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 SLC25A36Q96CQ1 311 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 ASB9Q96DX5 294 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 SLC41A3Q96GZ6 507 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 PYURFQ96I23 114 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 ZNF845Q96IR2 970 aaPredicted RBP5.68□□□□□ -1.5
LTBR-212ENST00000543542 RSRC1Q96IZ7 334 aaKnown RBP5.68□□□□□ -1.5
LTBR-212ENST00000543542 EPYCQ99645 322 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 TM9SF2Q99805 663 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 VKORC1Q9BQB6 163 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 WFDC6Q9BQY6 131 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 TTYH2Q9BSA4 534 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 NAA11Q9BSU3 229 aaPredicted RBP5.68□□□□□ -1.5
LTBR-212ENST00000543542 FNDC11Q9BVV2 318 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 OR11A1Q9GZK7 315 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 ADAM19Q9H013 955 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 CALHM2Q9HA72 323 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 ACTR3BQ9P1U1 418 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 RHCGQ9UBD6 479 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 ERRFI1Q9UJM3 462 aaPredicted RBP5.68□□□□□ -1.5
LTBR-212ENST00000543542 SLC7A7Q9UM01 511 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 HDGFL3Q9Y3E1 203 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 FAM208BQ5VWN6 2430 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 COL6A6A6NMZ7 2263 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 CHD6Q8TD26 2715 aa5.68□□□□□ -1.5
LTBR-212ENST00000543542 ARHGAP21Q5T5U3 1957 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 TLN1Q9Y490 2541 aaKnown RBP5.67□□□□□ -1.5
LTBR-212ENST00000543542 IGHV3-15A0A0B4J1V0 119 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 A0A0B4J2E0 115 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 A0A1B0GX12 115 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 HSPB2A8KAH6 182 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 342.3 ms