RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 PM20D2Q8IYS1 436 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 BPIFA2Q96DR5 249 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 PRRC1Q96M27 445 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 KLHL15Q96M94 604 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 LYSMD1Q96S90 227 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 BCL7BQ9BQE9 202 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 ICKQ9UPZ9 632 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 IER3IP1Q9Y5U9 82 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 A0A1W2PPK0 400 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 ISPDA4D126 451 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 DISC1C4P0D8 188 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 CCNKO75909 580 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 IGLV3-25P01717 112 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 IGHG1P01857 330 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 IL9P15248 144 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 CPT2P23786 658 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 ETV4P43268 484 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 TPTEP56180 551 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 PCBD1P61457 104 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 HBA1P69905 142 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 MZT1Q08AG7 82 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 HTR4Q13639 388 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 SLC5A12Q1EHB4 618 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 HLA-BQ31612 363 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 LIPKQ5VXJ0 399 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 KLBQ86Z14 1044 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 CNIH3Q8TBE1 160 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF300Q96RE9 604 aaPredicted RBP6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 A0A087WV62 115 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 ANKRD30BLA7E2S9 258 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 MITFO75030 526 aaPredicted RBP6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 ACTL6BO94805 426 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 PTHP01270 115 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 BCL6P41182 706 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 HOXC5Q00444 222 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 ZBED5Q49AG3 693 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF773Q6PK81 442 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 SBSNQ6UWP8 590 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF367Q7RTV3 350 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 BPHLQ86WA6 291 aaPredicted RBP6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 ETFBKMTQ8IXQ9 262 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 MS4A15Q8N5U1 240 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 OR5L1Q8NGL2 311 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF675Q8TD23 568 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 MED30Q96HR3 178 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 OR51B6Q9H340 312 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 NMNAT1Q9HAN9 279 aaPredicted RBP6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 GPR52Q9Y2T5 361 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 WIF1Q9Y5W5 379 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 DOCK2Q92608 1830 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 FAM171A2A8MVW0 826 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 RASAL1O95294 804 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 ANXA3P12429 323 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 CEBPDP49716 269 aaPredicted RBP6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 ATP5IP56385 69 aaPredicted RBP6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 EIF5AP63241 154 aaKnown RBP6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 SIRPAP78324 504 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 SPHARQ15513 63 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 C11orf91Q3C1V1 193 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 ABHD17CQ6PCB6 329 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 LANCL3Q6ZV70 420 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 THNSL2Q86YJ6 484 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 C1orf210Q8IVY1 113 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 CCDC36Q8IYA8 594 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 DTWD1Q8N5C7 304 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 FAM169BQ8N8A8 192 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 L3MBTL4Q8NA19 623 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 ADAMTS16Q8TE57 1224 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 UBTD2Q8WUN7 234 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 CHTF18Q8WVB6 975 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 SLC30A3Q99726 388 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 SPACA1Q9HBV2 294 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 ANKRD10Q9NXR5 420 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF443Q9Y2A4 671 aaPredicted RBP6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 R4GN57 208 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 DDX60LQ5H9U9 1706 aaKnown RBP6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 OR6C70A6NIJ9 312 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 A6NJY4 79 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 LMO7DNF2Z398 122 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 ARNTLO00327 626 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 SLC43A1O75387 559 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 SPDEFO95238 335 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 VNN2O95498 520 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 WDPCPO95876 746 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 CHRM4P08173 479 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 TMIGD3P0DMS9 266 aaPredicted RBP6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 GABRB3P28472 473 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 CAPZBP47756 277 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 RAB7AP51149 207 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 EIF2B1Q14232 305 aaKnown RBP6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 KCNAB1Q14722 419 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 SYPL1Q16563 259 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 C4orf17Q53FE4 359 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 SMUG1Q53HV7 270 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 C9orf135Q5VTT2 229 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 C18orf63Q68DL7 685 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 COMMD1Q8N668 190 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 FAM71F1Q96KD3 344 aaPredicted RBP6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 AMDHD1Q96NU7 426 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 PIGQQ9BRB3 760 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms