RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 ADAM19Q9H013 955 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 PAIP1Q9H074 479 aaKnown RBP11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 SERINC1Q9NRX5 453 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 RLIMQ9NVW2 624 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 BEX4Q9NWD9 120 aaPredicted RBP11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 KLHL9Q9P2J3 617 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 CHRNA9Q9UGM1 479 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 PCDHB14Q9Y5E9 798 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 PLCE1Q9P212 2302 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 CDHR4A6H8M9 788 aa11.62□□□□□ -0.55
TNFRSF1A-215ENST00000543359 SULT2B1O00204 365 aa11.62□□□□□ -0.55
TNFRSF1A-215ENST00000543359 PLAUP00749 431 aa11.62□□□□□ -0.55
TNFRSF1A-215ENST00000543359 DBIP07108 87 aaKnown RBP11.62□□□□□ -0.55
TNFRSF1A-215ENST00000543359 FESP07332 822 aa11.62□□□□□ -0.55
TNFRSF1A-215ENST00000543359 NR2F1P10589 423 aa11.62□□□□□ -0.55
TNFRSF1A-215ENST00000543359 FKBP2P26885 142 aaKnown RBP11.62□□□□□ -0.55
TNFRSF1A-215ENST00000543359 ACAA2P42765 397 aaKnown RBP11.62□□□□□ -0.55
TNFRSF1A-215ENST00000543359 SLC1A3P43003 542 aa11.62□□□□□ -0.55
TNFRSF1A-215ENST00000543359 CLK1P49759 484 aaKnown RBP11.62□□□□□ -0.55
TNFRSF1A-215ENST00000543359 ANXA11P50995 505 aaKnown RBP11.62□□□□□ -0.55
TNFRSF1A-215ENST00000543359 EPS8Q12929 822 aa11.62□□□□□ -0.55
TNFRSF1A-215ENST00000543359 P2RY6Q15077 328 aa11.62□□□□□ -0.55
TNFRSF1A-215ENST00000543359 PDK3Q15120 406 aa11.62□□□□□ -0.55
TNFRSF1A-215ENST00000543359 TSC22D1Q15714 1073 aa11.62□□□□□ -0.55
TNFRSF1A-215ENST00000543359 BEX5Q5H9J7 111 aa11.62□□□□□ -0.55
TNFRSF1A-215ENST00000543359 MRPL2Q5T653 305 aaKnown RBP11.62□□□□□ -0.55
TNFRSF1A-215ENST00000543359 ABLIM2Q6H8Q1 611 aa11.62□□□□□ -0.55
TNFRSF1A-215ENST00000543359 MSRB3Q8IXL7 192 aa11.62□□□□□ -0.55
TNFRSF1A-215ENST00000543359 ZNF563Q8TA94 476 aa11.62□□□□□ -0.55
TNFRSF1A-215ENST00000543359 WDR60Q8WVS4 1066 aa11.62□□□□□ -0.55
TNFRSF1A-215ENST00000543359 S100PBPQ96BU1 408 aa11.62□□□□□ -0.55
TNFRSF1A-215ENST00000543359 ITCHQ96J02 903 aa11.62□□□□□ -0.55
TNFRSF1A-215ENST00000543359 PIP5K1AQ99755 562 aa11.62□□□□□ -0.55
TNFRSF1A-215ENST00000543359 TACO1Q9BSH4 297 aaKnown RBP11.62□□□□□ -0.55
TNFRSF1A-215ENST00000543359 HDHD5Q9BXW7 423 aa11.62□□□□□ -0.55
TNFRSF1A-215ENST00000543359 OR11A1Q9GZK7 315 aa11.62□□□□□ -0.55
TNFRSF1A-215ENST00000543359 PRSS50Q9UI38 385 aa11.62□□□□□ -0.55
TNFRSF1A-215ENST00000543359 OSGIN1Q9UJX0 560 aa11.62□□□□□ -0.55
TNFRSF1A-215ENST00000543359 HDGFL3Q9Y3E1 203 aa11.62□□□□□ -0.55
TNFRSF1A-215ENST00000543359 TMEM72A0PK05 275 aa11.61□□□□□ -0.55
TNFRSF1A-215ENST00000543359 CFAP73A6NFT4 308 aa11.61□□□□□ -0.55
TNFRSF1A-215ENST00000543359 ZNF208O43345 1280 aa11.61□□□□□ -0.55
TNFRSF1A-215ENST00000543359 DNPH1O43598 174 aa11.61□□□□□ -0.55
TNFRSF1A-215ENST00000543359 RAMP1O60894 148 aa11.61□□□□□ -0.55
TNFRSF1A-215ENST00000543359 PMS2P2O95744 297 aa11.61□□□□□ -0.55
TNFRSF1A-215ENST00000543359 ADAP00813 363 aa11.61□□□□□ -0.55
TNFRSF1A-215ENST00000543359 NUDT7P0C024 238 aa11.61□□□□□ -0.55
TNFRSF1A-215ENST00000543359 IMPDH2P12268 514 aa11.61□□□□□ -0.55
TNFRSF1A-215ENST00000543359 BMP2P12643 396 aa11.61□□□□□ -0.55
TNFRSF1A-215ENST00000543359 IL7RP16871 459 aa11.61□□□□□ -0.55
TNFRSF1A-215ENST00000543359 RIPPLY3P57055 190 aa11.61□□□□□ -0.55
TNFRSF1A-215ENST00000543359 CSNK2A1P68400 391 aaPredicted RBP11.61□□□□□ -0.55
TNFRSF1A-215ENST00000543359 TAB1Q15750 504 aa11.61□□□□□ -0.55
TNFRSF1A-215ENST00000543359 SLC2A7Q6PXP3 512 aa11.61□□□□□ -0.55
TNFRSF1A-215ENST00000543359 BLOC1S3Q6QNY0 202 aa11.61□□□□□ -0.55
TNFRSF1A-215ENST00000543359 ZNF836Q6ZNA1 936 aa11.61□□□□□ -0.55
TNFRSF1A-215ENST00000543359 Q6ZT83 130 aa11.61□□□□□ -0.55
TNFRSF1A-215ENST00000543359 VRK2Q86Y07 508 aa11.61□□□□□ -0.55
TNFRSF1A-215ENST00000543359 CLIP4Q8N3C7 705 aa11.61□□□□□ -0.55
TNFRSF1A-215ENST00000543359 STEAP2Q8NFT2 490 aa11.61□□□□□ -0.55
TNFRSF1A-215ENST00000543359 LRRC8CQ8TDW0 803 aa11.61□□□□□ -0.55
TNFRSF1A-215ENST00000543359 CCDC28BQ9BUN5 200 aa11.61□□□□□ -0.55
TNFRSF1A-215ENST00000543359 RMND5AQ9H871 391 aa11.61□□□□□ -0.55
TNFRSF1A-215ENST00000543359 FANCFQ9NPI8 374 aa11.61□□□□□ -0.55
TNFRSF1A-215ENST00000543359 TCF7L2Q9NQB0 619 aa11.61□□□□□ -0.55
TNFRSF1A-215ENST00000543359 SLC25A37Q9NYZ2 338 aa11.61□□□□□ -0.55
TNFRSF1A-215ENST00000543359 SLAMF8Q9P0V8 285 aa11.61□□□□□ -0.55
TNFRSF1A-215ENST00000543359 TRAPPC4Q9Y296 219 aa11.61□□□□□ -0.55
TNFRSF1A-215ENST00000543359 CSPG4Q6UVK1 2322 aa11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 TRBV5-3A0A0A0MS03 114 aa11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 TMED7-TICAM2A0A0A6YYA0 188 aa11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 ZC3H12DA2A288 527 aaKnown RBP11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 PRG2P13727 222 aa11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 H2AFXP16104 143 aaPredicted RBP11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 TACR3P29371 465 aa11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 CRATP43155 626 aa11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 HTR3AP46098 478 aa11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 POLR2HP52434 150 aaKnown RBP11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 SLC16A1P53985 500 aa11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 DSTNP60981 165 aa11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 ITGADQ13349 1161 aa11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 RGNQ15493 299 aa11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 LRIF1Q5T3J3 769 aa11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 GALNT5Q7Z7M9 940 aa11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 WFDC8Q8IUA0 241 aa11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 CCDC103Q8IW40 242 aa11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 C10orf111Q8N326 155 aa11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 OR52P1PQ8NH57 321 aa11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 LILRB1Q8NHL6 650 aaPredicted RBP11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 DNAJA3Q96EY1 480 aa11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 PLPPR2Q96GM1 343 aa11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 TMEM19Q96HH6 336 aa11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 UBTD1Q9HAC8 227 aa11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 BCL2L10Q9HD36 194 aa11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 TMEM181Q9P2C4 612 aa11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 P2RX2Q9UBL9 471 aa11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 PRDM4Q9UKN5 801 aa11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 TMED7Q9Y3B3 224 aa11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 SPIN1Q9Y657 262 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms