RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 SQLEQ14534 574 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 SPDYE7PQ495Y7 208 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 SPANXN4Q5MJ08 99 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 AADACL4Q5VUY2 407 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 METTL21CQ5VZV1 264 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 CD276Q5ZPR3 534 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 OR4F3Q6IEY1 312 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 CGB2Q6NT52 195 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 H3F3CQ6NXT2 135 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 ETV3LQ6ZN32 361 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 HPS6Q86YV9 775 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 C9orf40Q8IXQ3 194 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 LGI4Q8N135 537 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 BEST3Q8N1M1 668 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 EXD3Q8N9H8 876 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 SPERTQ8NA61 448 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 OR7G2Q8NG99 324 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 OR8J2Q8NGG1 315 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 OR4A15Q8NGL6 344 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 NUBPLQ8TB37 319 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 OR5P2Q8WZ92 322 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 PSMF1Q92530 271 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 THRSPQ92748 146 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 BCL2L2Q92843 193 aaPredicted RBP4.67□□□□□ -1.66
CLIP1-217ENST00000543205 CTHRC1Q96CG8 243 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 TEX37Q96LM6 180 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 OR52E6Q96RD3 313 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 C3orf14Q9HBI5 128 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 TMEM140Q9NV12 185 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 TAS2R9Q9NYW1 312 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 DNAJB11Q9UBS4 358 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 ZNF639Q9UID6 485 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 ZNF223Q9UK11 482 aaPredicted RBP4.67□□□□□ -1.66
CLIP1-217ENST00000543205 YARS2Q9Y2Z4 477 aaKnown RBP4.67□□□□□ -1.66
CLIP1-217ENST00000543205 COPG1Q9Y678 874 aaKnown RBP4.67□□□□□ -1.66
CLIP1-217ENST00000543205 PTPRQQ9UMZ3 2332 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 PTPN13Q12923 2485 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 TENM4Q6N022 2769 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 PRSS51A0A1B0GVH4 220 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 C5orf51A6NDU8 294 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 KDM4EB2RXH2 506 aaPredicted RBP4.67□□□□□ -1.66
CLIP1-217ENST00000543205 C9JVG2 144 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 K7EM74 188 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 UPK1AO00322 258 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 RNASET2O00584 256 aaKnown RBP4.67□□□□□ -1.66
CLIP1-217ENST00000543205 ST8SIA3O43173 380 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 EMC8O43402 210 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 GMFGO60234 142 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 SEMA7AO75326 666 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 ITGA10O75578 1167 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 OR2J2O76002 312 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 CPSF4O95639 269 aaKnown RBP4.67□□□□□ -1.66
CLIP1-217ENST00000543205 WDPCPO95876 746 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 F10P00742 488 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 CLPSP04118 112 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 IFI6P09912 130 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 PLA2G2AP14555 144 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 GPX3P22352 226 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 SOAT1P35610 550 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 CCT3P49368 545 aaKnown RBP4.67□□□□□ -1.66
CLIP1-217ENST00000543205 MRPL19P49406 292 aaKnown RBP4.67□□□□□ -1.66
CLIP1-217ENST00000543205 CDK9P50750 372 aaKnown RBP4.67□□□□□ -1.66
CLIP1-217ENST00000543205 DGKQP52824 942 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 PRKAG1P54619 331 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 EFNB1P98172 346 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 OC90Q02509 493 aaPredicted RBP4.67□□□□□ -1.66
CLIP1-217ENST00000543205 ZNF155Q12901 538 aaPredicted RBP4.67□□□□□ -1.66
CLIP1-217ENST00000543205 EBPQ15125 230 aaKnown RBP4.67□□□□□ -1.66
CLIP1-217ENST00000543205 ZNHIT3Q15649 155 aaPredicted RBP4.67□□□□□ -1.66
CLIP1-217ENST00000543205 SGCBQ16585 318 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 AARDQ4LEZ3 155 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 AGKQ53H12 422 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 PIGGQ5H8A4 983 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 FHL5Q5TD97 284 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 BHLHB9Q6PI77 547 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 IGFL3Q6UXB1 125 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 NHLRC1Q6VVB1 395 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 SPATA21Q7Z572 469 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 ANKRD46Q86W74 232 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 OR2L13Q8N349 312 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 TMEM156Q8N614 296 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 HORMAD2Q8N7B1 307 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 ZNF615Q8N8J6 731 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 Q8NA96 180 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 TNIP2Q8NFZ5 429 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 OR9I1Q8NGQ6 314 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 C16orf52Q8NHV5 167 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 SLC22A8Q8TCC7 542 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 UTP23Q9BRU9 249 aaKnown RBP4.67□□□□□ -1.66
CLIP1-217ENST00000543205 SPATA5L1Q9BVQ7 753 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 WWTR1Q9GZV5 400 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 RMND5AQ9H871 391 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 ANKRA2Q9H9E1 313 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 CENPMQ9NSP4 180 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 FAM212BQ9NTI7 297 aaPredicted RBP4.67□□□□□ -1.66
CLIP1-217ENST00000543205 TMEM45AQ9NWC5 275 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 FAM120CQ9NX05 1096 aaKnown RBP4.67□□□□□ -1.66
CLIP1-217ENST00000543205 CCDC167Q9P0B6 97 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 NOTCH2Q04721 2471 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 SPTAN1Q13813 2472 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms