RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 NT5DC2Q9H857 520 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 ANKRA2Q9H9E1 313 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 ESM1Q9NQ30 184 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 ZNF71Q9NQZ8 489 aaPredicted RBP3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 ZFP57Q9NU63 452 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 IFNKQ9P0W0 207 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 PSMC3IPQ9P2W1 217 aaPredicted RBP3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 ZMAT5Q9UDW3 170 aaKnown RBP3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 SEC14L4Q9UDX3 406 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 ZNF221Q9UK13 617 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 TMCO1Q9UM00 188 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 ABCG2Q9UNQ0 655 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 RASD1Q9Y272 281 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 ATP6V1DQ9Y5K8 247 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 GRIN2DO15399 1336 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 FRMPD4Q14CM0 1322 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 TTC28Q96AY4 2481 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 SZT2Q5T011 3432 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 RANBP2P49792 3224 aaKnown RBP3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 CEP290O15078 2479 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 CKAP5Q14008 2032 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 ARID2Q68CP9 1835 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 KIF20BQ96Q89 1820 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 A0A1W2PP64 1363 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 MAP3K19Q56UN5 1328 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 CDHR2Q9BYE9 1310 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 USP42Q9H9J4 1324 aaKnown RBP3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 GOLGA6L4A6NEF3 574 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 ACOD1A6NK06 481 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 C15orf61A6NNL5 157 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 LRRIQ3A6PVS8 624 aaPredicted RBP3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 FBP2O00757 339 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 AKR7A2O43488 359 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 MGRN1O60291 552 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 SHOX2O60902 331 aaPredicted RBP3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 FLOT1O75955 427 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 DIRAS1O95057 198 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 JCHAINP01591 159 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 FTH1P02794 183 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 IGFBP1P08833 259 aaPredicted RBP3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 RPSAP08865 295 aaKnown RBP3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 HOXB7P09629 217 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 ATP1B2P14415 290 aaPredicted RBP3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 CD1DP15813 335 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 IMPDH1P20839 514 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 PRKAR2BP31323 418 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 SLC11A1P49279 550 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 DUSP3P51452 185 aaPredicted RBP3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 CLDN8P56748 225 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 C21orf59P57076 290 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 VSNL1P62760 191 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 OC90Q02509 493 aaPredicted RBP3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 IFFO1Q0D2I5 559 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 MAB21L1Q13394 359 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 PEX6Q13608 980 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 FASTKQ14296 549 aaKnown RBP3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 GK3PQ14409 553 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 CASP8Q14790 479 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 MTF1Q14872 753 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 MLF2Q15773 248 aaPredicted RBP3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 CHRNA6Q15825 494 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 MICBQ29980 383 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 SLC25A52Q3SY17 297 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 TMEM52BQ4KMG9 183 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 TP53I3Q53FA7 332 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 CEP85LQ5SZL2 805 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 KIAA1161Q6NSJ0 714 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 PRSS57Q6UWY2 283 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 KIF6Q6ZMV9 814 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 C9orf139Q6ZV77 190 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 C1QL2Q7Z5L3 287 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 GTPBP8Q8N3Z3 284 aaPredicted RBP3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 FGFRL1Q8N441 504 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 OR1B1Q8NGR6 318 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 ELMO1Q92556 727 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 SLC38A4Q969I6 547 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 LRRC45Q96CN5 670 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 TNFRSF13CQ96RJ3 184 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 FAM173AQ9BQD7 235 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 DPH7Q9BTV6 452 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 SLC29A3Q9BZD2 475 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 DNTTIP1Q9H147 329 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 VCX3BQ9H321 246 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 XKR8Q9H6D3 395 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 NARFLQ9H6Q4 476 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 ZDHHC18Q9NUE0 388 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 ZNHIT6Q9NWK9 470 aaKnown RBP3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 SIGLEC8Q9NYZ4 499 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 PDP1Q9P0J1 537 aaPredicted RBP3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 CIDEBQ9UHD4 219 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 SLC7A8Q9UHI5 535 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 GGA2Q9UJY4 613 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 IKZF2Q9UKS7 526 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 PAIP2BQ9ULR5 123 aaKnown RBP3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 ICAM5Q9UMF0 924 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 PRPF19Q9UMS4 504 aaKnown RBP3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 PACSIN2Q9UNF0 486 aaPredicted RBP3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 PPP1R3CQ9UQK1 317 aa3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 CSDC2Q9Y534 153 aaKnown RBP3.31□□□□□ -1.88
SFSWAP-211ENST00000542813 TAF1LQ8IZX4 1826 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms