RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 ZNF605Q86T29 641 aa20.86■□□□□ 0.93
HOMER3-205ENST00000542541 LILRA2Q8N149 483 aa20.86■□□□□ 0.93
HOMER3-205ENST00000542541 DNAJB9Q9UBS3 223 aa20.86■□□□□ 0.93
HOMER3-205ENST00000542541 LIPGQ9Y5X9 500 aa20.86■□□□□ 0.93
HOMER3-205ENST00000542541 H3BML4 177 aa20.86■□□□□ 0.93
HOMER3-205ENST00000542541 AQP7O14520 342 aa20.86■□□□□ 0.93
HOMER3-205ENST00000542541 EFNA2O43921 213 aa20.86■□□□□ 0.93
HOMER3-205ENST00000542541 DEAF1O75398 565 aaPredicted RBP20.86■□□□□ 0.93
HOMER3-205ENST00000542541 TIPRLO75663 272 aa20.86■□□□□ 0.93
HOMER3-205ENST00000542541 PEPDP12955 493 aa20.86■□□□□ 0.93
HOMER3-205ENST00000542541 BMP7P18075 431 aa20.86■□□□□ 0.93
HOMER3-205ENST00000542541 CCNA2P20248 432 aa20.86■□□□□ 0.93
HOMER3-205ENST00000542541 POU3F2P20265 443 aaPredicted RBP20.86■□□□□ 0.93
HOMER3-205ENST00000542541 FASP25445 335 aa20.86■□□□□ 0.93
HOMER3-205ENST00000542541 RRM2P31350 389 aa20.86■□□□□ 0.93
HOMER3-205ENST00000542541 CLK1P49759 484 aaKnown RBP20.86■□□□□ 0.93
HOMER3-205ENST00000542541 ELF3P78545 371 aaPredicted RBP20.86■□□□□ 0.93
HOMER3-205ENST00000542541 VASNQ6EMK4 673 aa20.86■□□□□ 0.93
HOMER3-205ENST00000542541 C5orf46Q6UWT4 87 aa20.86■□□□□ 0.93
HOMER3-205ENST00000542541 LINC00114Q6XXX2 140 aa20.86■□□□□ 0.93
HOMER3-205ENST00000542541 SARAFQ96BY9 339 aa20.86■□□□□ 0.93
HOMER3-205ENST00000542541 DDIT4LQ96D03 193 aa20.86■□□□□ 0.93
HOMER3-205ENST00000542541 DHRS1Q96LJ7 313 aa20.86■□□□□ 0.93
HOMER3-205ENST00000542541 SLX1AQ9BQ83 275 aa20.86■□□□□ 0.93
HOMER3-205ENST00000542541 REEP1Q9H902 201 aa20.86■□□□□ 0.93
HOMER3-205ENST00000542541 S100A14Q9HCY8 104 aa20.86■□□□□ 0.93
HOMER3-205ENST00000542541 A8MVM7 634 aa20.85■□□□□ 0.93
HOMER3-205ENST00000542541 LYPD3O95274 346 aa20.85■□□□□ 0.93
HOMER3-205ENST00000542541 WISP1O95388 367 aa20.85■□□□□ 0.93
HOMER3-205ENST00000542541 RBM34P42696 430 aaKnown RBP20.85■□□□□ 0.93
HOMER3-205ENST00000542541 GK3PQ14409 553 aa20.85■□□□□ 0.93
HOMER3-205ENST00000542541 BCL2A1Q16548 175 aa20.85■□□□□ 0.93
HOMER3-205ENST00000542541 TTC33Q6PID6 262 aaPredicted RBP20.85■□□□□ 0.93
HOMER3-205ENST00000542541 PRSS27Q9BQR3 290 aa20.85■□□□□ 0.93
HOMER3-205ENST00000542541 SMG1Q96Q15 3661 aaKnown RBP20.84■□□□□ 0.93
HOMER3-205ENST00000542541 OR14I1A6ND48 311 aa20.84■□□□□ 0.93
HOMER3-205ENST00000542541 CLOCKO15516 846 aa20.84■□□□□ 0.93
HOMER3-205ENST00000542541 LDLRP01130 860 aa20.84■□□□□ 0.93
HOMER3-205ENST00000542541 IL11P20809 199 aa20.84■□□□□ 0.93
HOMER3-205ENST00000542541 FOXD4Q12950 439 aaPredicted RBP20.84■□□□□ 0.93
HOMER3-205ENST00000542541 PRR30Q53SZ7 412 aaPredicted RBP20.84■□□□□ 0.93
HOMER3-205ENST00000542541 RRM2BQ7LG56 351 aa20.84■□□□□ 0.93
HOMER3-205ENST00000542541 ATP6V1C2Q8NEY4 427 aa20.84■□□□□ 0.93
HOMER3-205ENST00000542541 CPT1CQ8TCG5 803 aa20.84■□□□□ 0.93
HOMER3-205ENST00000542541 STK35Q8TDR2 534 aa20.84■□□□□ 0.93
HOMER3-205ENST00000542541 TMEM43Q9BTV4 400 aa20.84■□□□□ 0.93
HOMER3-205ENST00000542541 SLC19A3Q9BZV2 496 aa20.84■□□□□ 0.93
HOMER3-205ENST00000542541 MAN2C1Q9NTJ4 1040 aa20.84■□□□□ 0.93
HOMER3-205ENST00000542541 TMCC3Q9ULS5 477 aa20.84■□□□□ 0.93
HOMER3-205ENST00000542541 TMEM72A0PK05 275 aa20.83■□□□□ 0.93
HOMER3-205ENST00000542541 KALRNO60229 2985 aa20.83■□□□□ 0.93
HOMER3-205ENST00000542541 TFPIP10646 304 aa20.83■□□□□ 0.93
HOMER3-205ENST00000542541 TDGF1P3P51864 188 aa20.83■□□□□ 0.93
HOMER3-205ENST00000542541 HMGA2P52926 109 aa20.83■□□□□ 0.93
HOMER3-205ENST00000542541 TMEM176BQ3YBM2 270 aaPredicted RBP20.83■□□□□ 0.93
HOMER3-205ENST00000542541 SYT14P1Q58G82 188 aa20.83■□□□□ 0.93
HOMER3-205ENST00000542541 FGD3Q5JSP0 725 aa20.83■□□□□ 0.93
HOMER3-205ENST00000542541 NKAIN4Q8IVV8 208 aa20.83■□□□□ 0.93
HOMER3-205ENST00000542541 OR52J3Q8NH60 311 aa20.83■□□□□ 0.93
HOMER3-205ENST00000542541 ACOT11Q8WXI4 607 aaPredicted RBP20.83■□□□□ 0.93
HOMER3-205ENST00000542541 BBC3Q96PG8 261 aaPredicted RBP20.83■□□□□ 0.93
HOMER3-205ENST00000542541 EPYCQ99645 322 aa20.83■□□□□ 0.93
HOMER3-205ENST00000542541 TIMP4Q99727 224 aa20.83■□□□□ 0.93
HOMER3-205ENST00000542541 BDH2Q9BUT1 245 aa20.83■□□□□ 0.93
HOMER3-205ENST00000542541 ZNF426Q9BUY5 554 aa20.83■□□□□ 0.93
HOMER3-205ENST00000542541 TMEM185BQ9H7F4 350 aa20.83■□□□□ 0.93
HOMER3-205ENST00000542541 SAMHD1Q9Y3Z3 626 aaKnown RBP20.83■□□□□ 0.93
HOMER3-205ENST00000542541 A0A1B0GTH9 108 aa20.82■□□□□ 0.92
HOMER3-205ENST00000542541 H3BNX3 289 aa20.82■□□□□ 0.92
HOMER3-205ENST00000542541 TNFRSF11BO00300 401 aa20.82■□□□□ 0.92
HOMER3-205ENST00000542541 WISP2O76076 250 aa20.82■□□□□ 0.92
HOMER3-205ENST00000542541 STARP49675 285 aa20.82■□□□□ 0.92
HOMER3-205ENST00000542541 MLLT10P55197 1068 aa20.82■□□□□ 0.92
HOMER3-205ENST00000542541 ATP6AP1Q15904 470 aa20.82■□□□□ 0.92
HOMER3-205ENST00000542541 DCST1Q5T197 706 aa20.82■□□□□ 0.92
HOMER3-205ENST00000542541 RNF113BQ8IZP6 322 aaKnown RBP20.82■□□□□ 0.92
HOMER3-205ENST00000542541 TMEM239Q8WW34 195 aa20.82■□□□□ 0.92
HOMER3-205ENST00000542541 SMPDL3BQ92485 455 aa20.82■□□□□ 0.92
HOMER3-205ENST00000542541 POTEKPQ9BYX7 375 aa20.82■□□□□ 0.92
HOMER3-205ENST00000542541 SPRR3Q9UBC9 169 aa20.82■□□□□ 0.92
HOMER3-205ENST00000542541 NCKAP5O14513 1909 aa20.82■□□□□ 0.92
HOMER3-205ENST00000542541 EDN3P14138 238 aa20.82■□□□□ 0.92
HOMER3-205ENST00000542541 SFTPDP35247 375 aa20.82■□□□□ 0.92
HOMER3-205ENST00000542541 LHX2P50458 406 aa20.82■□□□□ 0.92
HOMER3-205ENST00000542541 CRYZQ08257 329 aaKnown RBP20.82■□□□□ 0.92
HOMER3-205ENST00000542541 PDSS1Q5T2R2 415 aa20.82■□□□□ 0.92
HOMER3-205ENST00000542541 ZNF730Q6ZMV8 503 aa20.82■□□□□ 0.92
HOMER3-205ENST00000542541 WDR88Q6ZMY6 472 aa20.82■□□□□ 0.92
HOMER3-205ENST00000542541 ESPNLQ6ZVH7 1005 aa20.82■□□□□ 0.92
HOMER3-205ENST00000542541 MEIOBQ8N635 442 aa20.82■□□□□ 0.92
HOMER3-205ENST00000542541 SLC7A13Q8TCU3 470 aa20.82■□□□□ 0.92
HOMER3-205ENST00000542541 TMEM255BQ8WV15 326 aa20.82■□□□□ 0.92
HOMER3-205ENST00000542541 KLHL15Q96M94 604 aa20.82■□□□□ 0.92
HOMER3-205ENST00000542541 ALPK1Q96QP1 1244 aa20.82■□□□□ 0.92
HOMER3-205ENST00000542541 KLHL4Q9C0H6 718 aa20.82■□□□□ 0.92
HOMER3-205ENST00000542541 MED31Q9Y3C7 131 aa20.82■□□□□ 0.92
HOMER3-205ENST00000542541 HDGFL3Q9Y3E1 203 aa20.82■□□□□ 0.92
HOMER3-205ENST00000542541 LYVE1Q9Y5Y7 322 aa20.82■□□□□ 0.92
HOMER3-205ENST00000542541 HTR3EA5X5Y0 456 aa20.81■□□□□ 0.92
HOMER3-205ENST00000542541 E2F6O75461 281 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms