RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 WDYHV1Q96HA8 205 aa15.43■□□□□ 0.06
LIG1-204ENST00000542460 ZNF300Q96RE9 604 aaPredicted RBP15.43■□□□□ 0.06
LIG1-204ENST00000542460 PRDM14Q9GZV8 571 aa15.43■□□□□ 0.06
LIG1-204ENST00000542460 TMEM185BQ9H7F4 350 aa15.43■□□□□ 0.06
LIG1-204ENST00000542460 NDUFAF4Q9P032 175 aa15.43■□□□□ 0.06
LIG1-204ENST00000542460 RIMS3Q9UJD0 308 aa15.43■□□□□ 0.06
LIG1-204ENST00000542460 A4GNTQ9UNA3 340 aa15.43■□□□□ 0.06
LIG1-204ENST00000542460 hCG_2039718K7EN88 272 aa15.43■□□□□ 0.06
LIG1-204ENST00000542460 ZNF208O43345 1280 aa15.43■□□□□ 0.06
LIG1-204ENST00000542460 CHP2O43745 196 aa15.43■□□□□ 0.06
LIG1-204ENST00000542460 SLC19A2O60779 497 aa15.43■□□□□ 0.06
LIG1-204ENST00000542460 RHCEP18577 417 aa15.43■□□□□ 0.06
LIG1-204ENST00000542460 CCNA2P20248 432 aa15.43■□□□□ 0.06
LIG1-204ENST00000542460 CLK1P49759 484 aaKnown RBP15.43■□□□□ 0.06
LIG1-204ENST00000542460 GXYLT1Q4G148 440 aa15.43■□□□□ 0.06
LIG1-204ENST00000542460 PIWIL3Q7Z3Z3 882 aaKnown RBP15.43■□□□□ 0.06
LIG1-204ENST00000542460 GDF7Q7Z4P5 450 aa15.43■□□□□ 0.06
LIG1-204ENST00000542460 ZDHHC21Q8IVQ6 265 aa15.43■□□□□ 0.06
LIG1-204ENST00000542460 UBQLNLQ8IYU4 475 aa15.43■□□□□ 0.06
LIG1-204ENST00000542460 ADGRG5Q8IZF4 528 aa15.43■□□□□ 0.06
LIG1-204ENST00000542460 MEIOBQ8N635 442 aa15.43■□□□□ 0.06
LIG1-204ENST00000542460 GALNT11Q8NCW6 608 aa15.43■□□□□ 0.06
LIG1-204ENST00000542460 ATP6V1C2Q8NEY4 427 aa15.43■□□□□ 0.06
LIG1-204ENST00000542460 CANT1Q8WVQ1 401 aa15.43■□□□□ 0.06
LIG1-204ENST00000542460 SMPDL3BQ92485 455 aa15.43■□□□□ 0.06
LIG1-204ENST00000542460 DDIT4LQ96D03 193 aa15.43■□□□□ 0.06
LIG1-204ENST00000542460 MPP4Q96JB8 637 aa15.43■□□□□ 0.06
LIG1-204ENST00000542460 SLC7A7Q9UM01 511 aa15.43■□□□□ 0.06
LIG1-204ENST00000542460 ZNF835Q9Y2P0 537 aa15.43■□□□□ 0.06
LIG1-204ENST00000542460 A0A087WUJ7 227 aa15.42■□□□□ 0.06
LIG1-204ENST00000542460 TMEM72A0PK05 275 aa15.42■□□□□ 0.06
LIG1-204ENST00000542460 J3KTA2 159 aa15.42■□□□□ 0.06
LIG1-204ENST00000542460 PRRG2O14669 202 aa15.42■□□□□ 0.06
LIG1-204ENST00000542460 FFAR1O14842 300 aa15.42■□□□□ 0.06
LIG1-204ENST00000542460 OPN1LWP04000 364 aa15.42■□□□□ 0.06
LIG1-204ENST00000542460 THY1P04216 161 aa15.42■□□□□ 0.06
LIG1-204ENST00000542460 TPOP07202 933 aa15.42■□□□□ 0.06
LIG1-204ENST00000542460 RAP2AP10114 183 aa15.42■□□□□ 0.06
LIG1-204ENST00000542460 SFTPDP35247 375 aa15.42■□□□□ 0.06
LIG1-204ENST00000542460 MAGEA2P43356 314 aa15.42■□□□□ 0.06
LIG1-204ENST00000542460 CLDN20P56880 219 aa15.42■□□□□ 0.06
LIG1-204ENST00000542460 SRYQ05066 204 aa15.42■□□□□ 0.06
LIG1-204ENST00000542460 ST3GAL3Q11203 375 aa15.42■□□□□ 0.06
LIG1-204ENST00000542460 TMEM176BQ3YBM2 270 aaPredicted RBP15.42■□□□□ 0.06
LIG1-204ENST00000542460 IQCCQ4KMZ1 466 aa15.42■□□□□ 0.06
LIG1-204ENST00000542460 SYT14P1Q58G82 188 aa15.42■□□□□ 0.06
LIG1-204ENST00000542460 LINC00114Q6XXX2 140 aa15.42■□□□□ 0.06
LIG1-204ENST00000542460 ESPNLQ6ZVH7 1005 aa15.42■□□□□ 0.06
LIG1-204ENST00000542460 GGNQ86UU5 652 aa15.42■□□□□ 0.06
LIG1-204ENST00000542460 ATCAYQ86WG3 371 aa15.42■□□□□ 0.06
LIG1-204ENST00000542460 RSRC1Q96IZ7 334 aaKnown RBP15.42■□□□□ 0.06
LIG1-204ENST00000542460 KLHL15Q96M94 604 aa15.42■□□□□ 0.06
LIG1-204ENST00000542460 ZNF347Q96SE7 839 aa15.42■□□□□ 0.06
LIG1-204ENST00000542460 FNDC11Q9BVV2 318 aa15.42■□□□□ 0.06
LIG1-204ENST00000542460 AURKCQ9UQB9 309 aa15.42■□□□□ 0.06
LIG1-204ENST00000542460 CAMK2AQ9UQM7 478 aa15.42■□□□□ 0.06
LIG1-204ENST00000542460 A8MVM7 634 aa15.41■□□□□ 0.06
LIG1-204ENST00000542460 PYCARD-AS1I3L0S3 204 aa15.41■□□□□ 0.06
LIG1-204ENST00000542460 EIF1AYO14602 144 aaKnown RBP15.41■□□□□ 0.06
LIG1-204ENST00000542460 ADAMDEC1O15204 470 aa15.41■□□□□ 0.06
LIG1-204ENST00000542460 SEC14L5O43304 696 aa15.41■□□□□ 0.06
LIG1-204ENST00000542460 LYPD3O95274 346 aa15.41■□□□□ 0.06
LIG1-204ENST00000542460 TFPIP10646 304 aa15.41■□□□□ 0.06
LIG1-204ENST00000542460 SLC7A1P30825 629 aa15.41■□□□□ 0.06
LIG1-204ENST00000542460 ERFP50548 548 aa15.41■□□□□ 0.06
LIG1-204ENST00000542460 SUCLG1P53597 346 aaKnown RBP15.41■□□□□ 0.06
LIG1-204ENST00000542460 CLDN15P56746 228 aa15.41■□□□□ 0.06
LIG1-204ENST00000542460 CCNIQ14094 377 aa15.41■□□□□ 0.06
LIG1-204ENST00000542460 IGFBP7Q16270 282 aa15.41■□□□□ 0.06
LIG1-204ENST00000542460 Q6ZPB1 254 aaPredicted RBP15.41■□□□□ 0.06
LIG1-204ENST00000542460 OFCC1Q8IZS5 231 aa15.41■□□□□ 0.06
LIG1-204ENST00000542460 OR5M9Q8NGP3 310 aa15.41■□□□□ 0.06
LIG1-204ENST00000542460 PIP5K1AQ99755 562 aa15.41■□□□□ 0.06
LIG1-204ENST00000542460 PNPLA3Q9NST1 481 aa15.41■□□□□ 0.06
LIG1-204ENST00000542460 TENM4Q6N022 2769 aa15.41■□□□□ 0.06
LIG1-204ENST00000542460 A0A0J9YW62 118 aa15.4■□□□□ 0.06
LIG1-204ENST00000542460 AHRRA9YTQ3 701 aa15.4■□□□□ 0.06
LIG1-204ENST00000542460 H0Y3Z8 333 aa15.4■□□□□ 0.06
LIG1-204ENST00000542460 H0YC42 278 aa15.4■□□□□ 0.06
LIG1-204ENST00000542460 PRSS23O95084 383 aa15.4■□□□□ 0.06
LIG1-204ENST00000542460 SHC1P29353 583 aa15.4■□□□□ 0.06
LIG1-204ENST00000542460 TPD52P55327 224 aaPredicted RBP15.4■□□□□ 0.06
LIG1-204ENST00000542460 ACTR3P61158 418 aa15.4■□□□□ 0.06
LIG1-204ENST00000542460 RPS3AP61247 264 aaKnown RBP15.4■□□□□ 0.06
LIG1-204ENST00000542460 SF3B4Q15427 424 aaKnown RBP eCLIP15.4■□□□□ 0.062e-7■■■■■ 46.3
LIG1-204ENST00000542460 C3AR1Q16581 482 aa15.4■□□□□ 0.06
LIG1-204ENST00000542460 EMC4Q5J8M3 183 aa15.4■□□□□ 0.06
LIG1-204ENST00000542460 PDSS1Q5T2R2 415 aa15.4■□□□□ 0.06
LIG1-204ENST00000542460 C5orf46Q6UWT4 87 aa15.4■□□□□ 0.06
LIG1-204ENST00000542460 CD163Q86VB7 1156 aa15.4■□□□□ 0.06
LIG1-204ENST00000542460 STK35Q8TDR2 534 aa15.4■□□□□ 0.06
LIG1-204ENST00000542460 ADGRG7Q96K78 797 aa15.4■□□□□ 0.06
LIG1-204ENST00000542460 OR5B2Q96R09 309 aa15.4■□□□□ 0.06
LIG1-204ENST00000542460 PRSS27Q9BQR3 290 aa15.4■□□□□ 0.06
LIG1-204ENST00000542460 CHID1Q9BWS9 393 aa15.4■□□□□ 0.06
LIG1-204ENST00000542460 POTEKPQ9BYX7 375 aa15.4■□□□□ 0.06
LIG1-204ENST00000542460 OR11A1Q9GZK7 315 aa15.4■□□□□ 0.06
LIG1-204ENST00000542460 NMNAT1Q9HAN9 279 aaPredicted RBP15.4■□□□□ 0.06
LIG1-204ENST00000542460 CCM2LQ9NUG4 571 aaPredicted RBP15.4■□□□□ 0.06
LIG1-204ENST00000542460 ALKBH4Q9NXW9 302 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms