RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 TRMT5Q32P41 509 aaKnown RBP8.68□□□□□ -1.02
YBX3-212ENST00000542002 SYT14P1Q58G82 188 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 C3orf33Q6P1S2 294 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 TMPPEQ6ZT21 453 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 NUFIP2Q7Z417 695 aaKnown RBP8.68□□□□□ -1.02
YBX3-212ENST00000542002 SPATA21Q7Z572 469 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 NET1Q7Z628 596 aaPredicted RBP8.68□□□□□ -1.02
YBX3-212ENST00000542002 CALHM3Q86XJ0 350 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 TUSC5Q8IXB3 177 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 SMYD1Q8NB12 490 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 RNF128Q8TEB7 428 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 ZNF775Q96BV0 537 aaPredicted RBP8.68□□□□□ -1.02
YBX3-212ENST00000542002 GMPPAQ96IJ6 420 aaPredicted RBP8.68□□□□□ -1.02
YBX3-212ENST00000542002 ZNF583Q96ND8 569 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 RBM24Q9BX46 236 aaKnown RBP8.68□□□□□ -1.02
YBX3-212ENST00000542002 PRRG4Q9BZD6 226 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 FAM107BQ9H098 131 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 MYLK2Q9H1R3 596 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 PIGMQ9H3S5 423 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 SERINC1Q9NRX5 453 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 PAQR5Q9NXK6 330 aaPredicted RBP8.68□□□□□ -1.02
YBX3-212ENST00000542002 CHRNA9Q9UGM1 479 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 PACSIN3Q9UKS6 424 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 MCTS1Q9ULC4 181 aaKnown RBP8.68□□□□□ -1.02
YBX3-212ENST00000542002 CORO2BQ9UQ03 480 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 IFT52Q9Y366 437 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 TMED7Q9Y3B3 224 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 ITPR2Q14571 2701 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 ARHGAP21Q5T5U3 1957 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 HCFC1P51610 2035 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 HEATR5AQ86XA9 2040 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 GJE1A6NN92 205 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 TMEM229AB2RXF0 380 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 SULT2B1O00204 365 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 MSTNO14793 375 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 MRASO14807 208 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 SMAD9O15198 467 aaKnown RBP8.67□□□□□ -1.02
YBX3-212ENST00000542002 SNX3O60493 162 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 TFPIP10646 304 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 CD8BP10966 210 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 COX4I1P13073 169 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 SLC7A1P30825 629 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 PRKAR1BP31321 381 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 KIR2DL3P43628 341 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 HTR3AP46098 478 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 POLR2HP52434 150 aaKnown RBP8.67□□□□□ -1.02
YBX3-212ENST00000542002 CYP51A1Q16850 503 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 COQ5Q5HYK3 327 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 PDSS1Q5T2R2 415 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 WBP2NLQ6ICG8 309 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 DHRS4L2Q6PKH6 230 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 FCRLAQ7L513 359 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 PIGWQ7Z7B1 504 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 CCDC103Q8IW40 242 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 ZNF440Q8IYI8 595 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 CADM2Q8N3J6 435 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 HIPK4Q8NE63 616 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 GPR32P1Q8NGA4 272 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 OR4D11Q8NGI4 311 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 CPNE4Q96A23 557 aaPredicted RBP8.67□□□□□ -1.02
YBX3-212ENST00000542002 C3orf49Q96BT1 292 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 RCN3Q96D15 328 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 C14orf79Q96F83 325 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 GPATCH1Q9BRR8 931 aaKnown RBP8.67□□□□□ -1.02
YBX3-212ENST00000542002 TIGARQ9NQ88 270 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 CMTM6Q9NX76 183 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 FAM53CQ9NYF3 392 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 CAPN7Q9Y6W3 813 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 APCP25054 2843 aa8.67□□□□□ -1.02
YBX3-212ENST00000542002 DOCK7Q96N67 2140 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 PDZD2O15018 2839 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 FAM221AA4D161 298 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 CCT8L1PA6NM43 557 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 SLC22A2O15244 555 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 ZNF208O43345 1280 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 CYTIPO60759 359 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 PRKD3O94806 890 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 OPN1SWP03999 348 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 FESP07332 822 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 YES1P07947 543 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 FCGR2AP12318 317 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 CD247P20963 164 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 AGTR1P30556 359 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 GNGT1P63211 74 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 H3F3AP84243 136 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 TLE4Q04727 773 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 EGR4Q05215 589 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 RBBP4Q09028 425 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 NPTX1Q15818 432 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 ZSWIM7Q19AV6 140 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 MMEL1Q495T6 779 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 EEF1A1P5Q5VTE0 462 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 C8orf82Q6P1X6 216 aaPredicted RBP8.66□□□□□ -1.02
YBX3-212ENST00000542002 ZNF550Q7Z398 422 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 ATG4DQ86TL0 474 aaPredicted RBP8.66□□□□□ -1.02
YBX3-212ENST00000542002 TSPYL5Q86VY4 417 aaPredicted RBP8.66□□□□□ -1.02
YBX3-212ENST00000542002 RBM45Q8IUH3 476 aaKnown RBP8.66□□□□□ -1.02
YBX3-212ENST00000542002 ARMC8Q8IUR7 673 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 C11orf65Q8NCR3 313 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 OR8J3Q8NGG0 315 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms