RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 ARPC1BO15143 372 aaKnown RBP14.94□□□□□ -0.02
VARS2-212ENST00000542001 NUPL2O15504 423 aaKnown RBP14.94□□□□□ -0.02
VARS2-212ENST00000542001 TRIM3O75382 744 aaPredicted RBP14.94□□□□□ -0.02
VARS2-212ENST00000542001 RBBP9O75884 186 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 PTPN6P29350 595 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 LCN1P31025 176 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 SFTPDP35247 375 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 CD79BP40259 229 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 MAGEB1P43366 347 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 ELOCQ15369 112 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 DPY19L4Q7Z388 723 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 MS4A15Q8N5U1 240 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 HHIPL1Q96JK4 782 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 PITX2Q99697 317 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 SERTAD3Q9UJW9 196 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 SLC35A3Q9Y2D2 325 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 AP1M2Q9Y6Q5 423 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 POM121CA8CG34 1229 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 GREM1O60565 184 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 ST6GAL1P15907 406 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 TRHRP34981 398 aaPredicted RBP14.93□□□□□ -0.02
VARS2-212ENST00000542001 OR7E24Q6IFN5 339 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 TMEM184AQ6ZMB5 413 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 MBOAT2Q6ZWT7 520 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 OR4M1Q8NGD0 313 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 ZNF717Q9BY31 904 aaPredicted RBP14.93□□□□□ -0.02
VARS2-212ENST00000542001 FBXO8Q9NRD0 319 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 PRODH2Q9UF12 536 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 DAPP1Q9UN19 280 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 A4GNTQ9UNA3 340 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 GABRA5P31644 462 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 TPMTP51580 245 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 DPTQ07507 201 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 SNTA1Q13424 505 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 SSX1Q16384 188 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 FAM69BQ5VUD6 431 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 ELMOD2Q8IZ81 293 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 SDR16C5Q8N3Y7 309 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 SLC38A1Q9H2H9 487 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 CDCP1Q9H5V8 836 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 RPH3AQ9Y2J0 694 aaPredicted RBP14.93□□□□□ -0.02
VARS2-212ENST00000542001 IGHV3-20A0A0C4DH32 117 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 ZSCAN5BA6NJL1 495 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 POLR1CO15160 346 aaPredicted RBP14.93□□□□□ -0.02
VARS2-212ENST00000542001 CISD3P0C7P0 127 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 PRAMEF17Q5VTA0 474 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 GKN2Q86XP6 184 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 RDH10Q8IZV5 341 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 ZNF566Q969W8 418 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 LMAN1LQ9HAT1 526 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 CD93Q9NPY3 652 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 LRIT1Q9P2V4 623 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 WDR81Q562E7 1941 aa14.93□□□□□ -0.02
VARS2-212ENST00000542001 M0R233 179 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 DSCR3O14972 297 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 SELENOFO60613 162 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 PPP1CAP62136 330 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 ACTC1P68032 377 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 ACTA1P68133 377 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 TFF2Q03403 129 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 MLF2Q15773 248 aaPredicted RBP14.92□□□□□ -0.02
VARS2-212ENST00000542001 CCDC58Q4VC31 144 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 TMEM225Q6GV28 225 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 ZNF322Q6U7Q0 402 aaPredicted RBP14.92□□□□□ -0.02
VARS2-212ENST00000542001 UBQLNLQ8IYU4 475 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 MFSD4AQ8N468 514 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 DNAAF1Q8NEP3 725 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 SLC6A7Q99884 636 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 TRPV4Q9HBA0 871 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 PRDM9Q9NQV7 894 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 PPIL1Q9Y3C6 166 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 PLXNA1Q9UIW2 1896 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 AGAP14A8MT82 685 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 KDM4EB2RXH2 506 aaPredicted RBP14.92□□□□□ -0.02
VARS2-212ENST00000542001 HSD11B1P28845 292 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 UGT2B10P36537 528 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 PSPHP78330 225 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 DEFA5Q01523 94 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 POU4F3Q15319 338 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 C3orf38Q5JPI3 329 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 LYPD4Q6UWN0 246 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 ZNF227Q86WZ6 799 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 OR6N1Q8NGY5 312 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 RNASE11Q8TAA1 199 aaKnown RBP14.92□□□□□ -0.02
VARS2-212ENST00000542001 ARL6Q9H0F7 186 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 SLC16A7O60669 478 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 MOSPD3O75425 235 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 KCNK2O95069 426 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 TRA2BP62995 288 aaKnown RBP14.92□□□□□ -0.02
VARS2-212ENST00000542001 OR2AJ1Q8NGZ0 328 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 ABHD4Q8TB40 342 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 GPN3Q9UHW5 284 aaPredicted RBP14.92□□□□□ -0.02
VARS2-212ENST00000542001 ADAM29Q9UKF5 820 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 MRPS2Q9Y399 296 aaKnown RBP14.92□□□□□ -0.02
VARS2-212ENST00000542001 NBASA2RRP1 2371 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 FZD7O75084 574 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 PRPH2P23942 346 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 DRD3P35462 400 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 DHRS4L2Q6PKH6 230 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 OR5AK2Q8NH90 309 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms