RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 CD40LGP29965 261 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 SFTPDP35247 375 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 AVPR1AP37288 418 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 MNDAP41218 407 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 FOLR3P41439 243 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 MATKP42679 507 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 NPBWR2P48146 333 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 PPP3CCP48454 512 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 ATP1B3P54709 279 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 DEFB103AP81534 67 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 ART3Q13508 389 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 FASTKD3Q14CZ7 662 aaKnown RBP4.93□□□□□ -1.62
DDB1-219ENST00000541513 TSC22D1Q15714 1073 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 KYAT1Q16773 422 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 KNOP1Q1ED39 458 aaKnown RBP4.93□□□□□ -1.62
DDB1-219ENST00000541513 ZNF699Q32M78 642 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 SPATS1Q496A3 300 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 GPR33Q49SQ1 333 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 ZNF542PQ5EBM4 170 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 PAPD7Q5XG87 772 aaKnown RBP4.93□□□□□ -1.62
DDB1-219ENST00000541513 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.93□□□□□ -1.623e-18■■■■□ 24.6
DDB1-219ENST00000541513 SHFQ7M4L6 423 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 ANKRD37Q7Z713 158 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 CYP4Z1Q86W10 505 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 C8orf31Q8N9H6 132 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 OR2AK2Q8NG84 335 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 OR13C3Q8NGS6 347 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 HCAR2Q8TDS4 363 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 FCAMRQ8WWV6 532 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 NAT6Q93015 286 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 CD101Q93033 1021 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 PHF21AQ96BD5 680 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 ZNF689Q96CS4 500 aaPredicted RBP4.93□□□□□ -1.62
DDB1-219ENST00000541513 ZNF514Q96K75 400 aaPredicted RBP4.93□□□□□ -1.62
DDB1-219ENST00000541513 CCDC42Q96M95 316 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 TSSK3Q96PN8 268 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 OR14A2Q96R54 314 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 IL4I1Q96RQ9 567 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 SLC30A2Q9BRI3 323 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 WACQ9BTA9 647 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 TRIM45Q9H8W5 580 aaPredicted RBP4.93□□□□□ -1.62
DDB1-219ENST00000541513 VIPAS39Q9H9C1 493 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 MOV10Q9HCE1 1003 aaKnown RBP4.93□□□□□ -1.62
DDB1-219ENST00000541513 DYRK4Q9NR20 520 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 PLEK2Q9NYT0 353 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 DCDC2Q9UHG0 476 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 SLC12A6Q9UHW9 1150 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 TINAGQ9UJW2 476 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 MAN1B1Q9UKM7 699 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 POFUT2Q9Y2G5 429 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 KLHDC2Q9Y2U9 406 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 PLXNA4Q9HCM2 1894 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 PRRC2BQ5JSZ5 2229 aaKnown RBP4.92□□□□□ -1.62
DDB1-219ENST00000541513 VWA8A3KMH1 1905 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 MTCL1Q9Y4B5 1905 aaKnown RBP4.92□□□□□ -1.62
DDB1-219ENST00000541513 KBTBD11-OT1A0A1B0GTJ5 212 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.92□□□□□ -1.62
DDB1-219ENST00000541513 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.92□□□□□ -1.62
DDB1-219ENST00000541513 RAB19A4D1S5 217 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 MGAT4DA6NG13 374 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 MROH6A6NGR9 719 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 OR6C70A6NIJ9 312 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 CENPBD1B2RD01 187 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 ANKRD63C9JTQ0 380 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 NPIPA7E9PJI5 369 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 H0YL77 283 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 TRAFD1O14545 582 aaPredicted RBP4.92□□□□□ -1.62
DDB1-219ENST00000541513 LDB2O43679 373 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 FAM189A1O60320 539 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 STX10O60499 249 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 B4GALT3O60512 393 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 SEMA7AO75326 666 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 WISP2O76076 250 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 BMP10O95393 424 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 NSA2O95478 260 aaKnown RBP4.92□□□□□ -1.62
DDB1-219ENST00000541513 RPS17P08708 135 aaKnown RBP4.92□□□□□ -1.62
DDB1-219ENST00000541513 F7P08709 466 aaPredicted RBP4.92□□□□□ -1.62
DDB1-219ENST00000541513 NPIPA8P0DM63 369 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 MLNP12872 115 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 GP1BBP13224 206 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 TSPAN8P19075 237 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 CCNE1P24864 410 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 HMOX2P30519 316 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 UQCRFS1P47985 274 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 DUSP3P51452 185 aaPredicted RBP4.92□□□□□ -1.62
DDB1-219ENST00000541513 CDH12P55289 794 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 RAD51Q06609 339 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 SLAMF1Q13291 335 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 PMS2P3Q13401 168 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 C1orf61Q13536 156 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 CEACAM7Q14002 265 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 KRT81Q14533 505 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 ZCWPW2Q504Y3 356 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 LCE4AQ5TA78 99 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 C17orf64Q86WR6 236 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 TRIM69Q86WT6 500 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 NUDCD3Q8IVD9 361 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 CHERPQ8IWX8 916 aaKnown RBP4.92□□□□□ -1.62
DDB1-219ENST00000541513 NELFCDQ8IXH7 590 aa4.92□□□□□ -1.62
DDB1-219ENST00000541513 ZC3H3Q8IXZ2 948 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms