RNA–Protein interactions for RNA: ENST00000541466.1

KNTC1-212, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 616 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-212ENST00000541466 SLC35E1Q96K37 410 aa1.95□□□□□ -2.1
KNTC1-212ENST00000541466 PGLYRP4Q96LB8 373 aa1.95□□□□□ -2.1
KNTC1-212ENST00000541466 C16orf45Q96MC5 204 aaPredicted RBP1.95□□□□□ -2.1
KNTC1-212ENST00000541466 SLC35A5Q9BS91 424 aa1.95□□□□□ -2.1
KNTC1-212ENST00000541466 TPPP3Q9BW30 176 aa1.95□□□□□ -2.1
KNTC1-212ENST00000541466 TMEM117Q9H0C3 514 aa1.95□□□□□ -2.1
KNTC1-212ENST00000541466 RHBGQ9H310 441 aa1.95□□□□□ -2.1
KNTC1-212ENST00000541466 SMYD3Q9H7B4 428 aa1.95□□□□□ -2.1
KNTC1-212ENST00000541466 SLC25A22Q9H936 323 aa1.95□□□□□ -2.1
KNTC1-212ENST00000541466 SLC17A5Q9NRA2 495 aa1.95□□□□□ -2.1
KNTC1-212ENST00000541466 ASF1AQ9Y294 204 aa1.95□□□□□ -2.1
KNTC1-212ENST00000541466 PDE4DIPQ5VU43 2346 aa1.95□□□□□ -2.1
KNTC1-212ENST00000541466 COL16A1Q07092 1604 aaPredicted RBP1.95□□□□□ -2.1
KNTC1-212ENST00000541466 CHD6Q8TD26 2715 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 RGS12O14924 1447 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 ATP10DQ9P241 1426 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 RAI1Q7Z5J4 1906 aaPredicted RBP1.94□□□□□ -2.1
KNTC1-212ENST00000541466 IGHV3OR16-13A0A075B7E8 117 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 PSMB11A5LHX3 300 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 NPIPA7E9PJI5 369 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 BCAS1O75363 584 aaPredicted RBP1.94□□□□□ -2.1
KNTC1-212ENST00000541466 P04436 131 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 IGHV4-34P06331 123 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 HOXC4P09017 264 aaPredicted RBP1.94□□□□□ -2.1
KNTC1-212ENST00000541466 ALOX5P09917 674 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 NPIPA8P0DM63 369 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 ATP6V1B2P21281 511 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 ATP6V1C1P21283 382 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 NT5EP21589 574 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 PRDX3P30048 256 aaKnown RBP1.94□□□□□ -2.1
KNTC1-212ENST00000541466 SHMT2P34897 504 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 DAP3P51398 398 aaKnown RBP1.94□□□□□ -2.1
KNTC1-212ENST00000541466 RIPK1Q13546 671 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 SLC36A3Q495N2 470 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 FAM71F2Q6NXP2 309 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 ACOT7LQ6ZUV0 252 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 GPATCH11Q8N954 259 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 SUMF2Q8NBJ7 301 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 FBXO30Q8TB52 745 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 FAM3CQ92520 227 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 OSTF1Q92882 214 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 RPUSD4Q96CM3 377 aaKnown RBP1.94□□□□□ -2.1
KNTC1-212ENST00000541466 NRTNQ99748 197 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 EDEM2Q9BV94 578 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 SLC25A39Q9BZJ4 359 aaPredicted RBP1.94□□□□□ -2.1
KNTC1-212ENST00000541466 ELOVL3Q9HB03 270 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 MMP26Q9NRE1 261 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 AIG1Q9NVV5 245 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 AATFQ9NY61 560 aaKnown RBP eCLIP1.94□□□□□ -2.1
KNTC1-212ENST00000541466 MTRF1LQ9UGC7 380 aaKnown RBP1.94□□□□□ -2.1
KNTC1-212ENST00000541466 PHF11Q9UIL8 331 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 LAMP5Q9UJQ1 280 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 ZNF225Q9UK10 706 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 NPIPA1Q9UND3 350 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 AK6Q9Y3D8 172 aaKnown RBP1.94□□□□□ -2.1
KNTC1-212ENST00000541466 SLCO1B1Q9Y6L6 691 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 AP1M2Q9Y6Q5 423 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 NHSL1Q5SYE7 1610 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 RAPGEF6Q8TEU7 1601 aa1.94□□□□□ -2.1
KNTC1-212ENST00000541466 CLSPNQ9HAW4 1339 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 YEATS2Q9ULM3 1422 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 GOLGB1Q14789 3259 aaKnown RBP1.93□□□□□ -2.1
KNTC1-212ENST00000541466 A0A0G2JRQ6 117 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 A0A1B0GUA9 196 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 A0A1B0GUS0 222 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 GJE1A6NN92 205 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 TRDCB7Z8K6 153 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 K7EPI3 171 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 RS1O15537 224 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 TRAF3IP2O43734 574 aaPredicted RBP1.93□□□□□ -2.1
KNTC1-212ENST00000541466 CXCL13O43927 109 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 OR10H3O60404 316 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 SMPD2O60906 423 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 LGALS2P05162 132 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 UGT2B4P06133 528 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 HEXBP07686 556 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 TSPY4P0CV99 314 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 TSPY10P0CW01 314 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 KRT13P13646 458 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 CCNCP24863 283 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 CA8P35219 290 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 ACAA2P42765 397 aaKnown RBP1.93□□□□□ -2.1
KNTC1-212ENST00000541466 KLK7P49862 253 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 HSD17B7P56937 341 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 PRPS1P60891 318 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 CNTN2Q02246 1040 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 MECOMQ03112 1051 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 UNC119Q13432 240 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 EIF4EBP2Q13542 120 aaPredicted RBP1.93□□□□□ -2.1
KNTC1-212ENST00000541466 TP53I3Q53FA7 332 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 TPGS2Q68CL5 300 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 CYB5R2Q6BCY4 276 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 GDPD3Q7L5L3 318 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 CLEC4FQ8N1N0 589 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 FTMTQ8N4E7 242 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 FAM71E2Q8N5Q1 922 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 ZNF433Q8N7K0 673 aaPredicted RBP1.93□□□□□ -2.1
KNTC1-212ENST00000541466 Q8N9L7 120 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 OR4D9Q8NGE8 314 aa1.93□□□□□ -2.1
KNTC1-212ENST00000541466 OR51S1Q8NGJ8 323 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms