RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 PRIM2P49643 509 aa8.09□□□□□ -1.11
YBX3-211ENST00000541351 RNF144AP50876 292 aaPredicted RBP8.09□□□□□ -1.11
YBX3-211ENST00000541351 BPIFB3P59826 476 aa8.09□□□□□ -1.11
YBX3-211ENST00000541351 LCN2P80188 198 aa8.09□□□□□ -1.11
YBX3-211ENST00000541351 SLC3A1Q07837 685 aa8.09□□□□□ -1.11
YBX3-211ENST00000541351 ZNF154Q13106 437 aa8.09□□□□□ -1.11
YBX3-211ENST00000541351 HIKESHIQ53FT3 197 aa8.09□□□□□ -1.11
YBX3-211ENST00000541351 FAM209AQ5JX71 171 aa8.09□□□□□ -1.11
YBX3-211ENST00000541351 FAM180BQ6P0A1 224 aa8.09□□□□□ -1.11
YBX3-211ENST00000541351 METTL2BQ6P1Q9 378 aaKnown RBP8.09□□□□□ -1.11
YBX3-211ENST00000541351 ZNF620Q6ZNG0 422 aa8.09□□□□□ -1.11
YBX3-211ENST00000541351 BCL6BQ8N143 479 aaPredicted RBP8.09□□□□□ -1.11
YBX3-211ENST00000541351 L3MBTL4Q8NA19 623 aa8.09□□□□□ -1.11
YBX3-211ENST00000541351 OR52E2Q8NGJ4 325 aa8.09□□□□□ -1.11
YBX3-211ENST00000541351 PHOSPHO1Q8TCT1 267 aa8.09□□□□□ -1.11
YBX3-211ENST00000541351 MAGEE2Q8TD90 523 aaPredicted RBP8.09□□□□□ -1.11
YBX3-211ENST00000541351 TAF15Q92804 592 aaKnown RBP eCLIP8.09□□□□□ -1.11
YBX3-211ENST00000541351 RHOJQ9H4E5 214 aa8.09□□□□□ -1.11
YBX3-211ENST00000541351 ELOVL6Q9H5J4 265 aa8.09□□□□□ -1.11
YBX3-211ENST00000541351 TXNDC16Q9P2K2 825 aa8.09□□□□□ -1.11
YBX3-211ENST00000541351 PURGQ9UJV8 347 aaKnown RBP8.09□□□□□ -1.11
YBX3-211ENST00000541351 SLC12A4Q9UP95 1085 aa8.09□□□□□ -1.11
YBX3-211ENST00000541351 TNPO3Q9Y5L0 923 aaKnown RBP8.09□□□□□ -1.11
YBX3-211ENST00000541351 POMT1Q9Y6A1 747 aa8.09□□□□□ -1.11
YBX3-211ENST00000541351 CCDC189A1A4V9 331 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 ZNF716A6NP11 495 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 ZNF587BE7ETH6 402 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 GTPBP1O00178 669 aaKnown RBP8.08□□□□□ -1.12
YBX3-211ENST00000541351 ZNF500O60304 480 aaPredicted RBP8.08□□□□□ -1.12
YBX3-211ENST00000541351 EIF1BO60739 113 aaKnown RBP8.08□□□□□ -1.12
YBX3-211ENST00000541351 RP2O75695 350 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 IGKV3-15P01624 115 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 IGLV1-44P01699 117 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 SFTPBP07988 381 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 IFI6P09912 130 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 PPIAL4GP0DN37 164 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 STMN1P16949 149 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 PRKCAP17252 672 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 TCN1P20061 433 aaPredicted RBP8.08□□□□□ -1.12
YBX3-211ENST00000541351 NTSP30990 170 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 ARR3P36575 388 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 KCNJ1P48048 391 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 SH3BGRP55822 239 aaPredicted RBP8.08□□□□□ -1.12
YBX3-211ENST00000541351 OR4D1Q15615 310 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 HFEQ30201 348 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 TBRG1Q3YBR2 411 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 NRN1LQ496H8 165 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 TECRLQ5HYJ1 363 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 AVPI1Q5T686 147 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 Q6ZTK2 550 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 RELL1Q8IUW5 271 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 PPIL6Q8IXY8 311 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 CCDC36Q8IYA8 594 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 PARP8Q8N3A8 854 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 NOA1Q8NC60 698 aaKnown RBP8.08□□□□□ -1.12
YBX3-211ENST00000541351 DEFB108BQ8NET1 73 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 OR4C3Q8NH37 302 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 SNX33Q8WV41 574 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 TMEM234Q8WY98 164 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 DYRK2Q92630 601 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 YIPF5Q969M3 257 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 FAM71F1Q96KD3 344 aaPredicted RBP8.08□□□□□ -1.12
YBX3-211ENST00000541351 IPPKQ9H8X2 491 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 GRID1Q9ULK0 1009 aa8.08□□□□□ -1.12
YBX3-211ENST00000541351 NOTCH3Q9UM47 2321 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 A0A096LPK6 155 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 A0A1W2PPW3 197 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 EFNA2O43921 213 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 MPIG6BO95866 241 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 MT-ND5P03915 603 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 GFAPP14136 432 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 FUT4P22083 530 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 CALCRP30988 508 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 LSP1P33241 339 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 CCNG1P51959 295 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 NCBP2P52298 156 aaKnown RBP eCLIP8.07□□□□□ -1.12
YBX3-211ENST00000541351 FOXG1P55316 489 aaPredicted RBP8.07□□□□□ -1.12
YBX3-211ENST00000541351 PROK1P58294 105 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 ZNF117Q03924 483 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 HGFACQ04756 655 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 MGAT5Q09328 741 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 GTF2H2Q13888 395 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 CBFBQ13951 182 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 FRG1Q14331 258 aaKnown RBP8.07□□□□□ -1.12
YBX3-211ENST00000541351 SYT14P1Q58G82 188 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 SLC25A53Q5H9E4 307 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 TSPO2Q5TGU0 170 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 GTF2H2CQ6P1K8 395 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 TMEM154Q6P9G4 183 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 OR2L13Q8N349 312 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 CDRT4Q8N9R6 151 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 SLC16A11Q8NCK7 471 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 OR4S1Q8NGB4 309 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 LINC01006Q8NI28 216 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 TBC1D15Q8TC07 691 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 NAA11Q9BSU3 229 aaPredicted RBP8.07□□□□□ -1.12
YBX3-211ENST00000541351 HOXD1Q9GZZ0 328 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 ALG9Q9H6U8 611 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 BRF2Q9HAW0 419 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 NMRAL1Q9HBL8 299 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms