RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 FAM215AQ9Y5M1 114 aa13.94□□□□□ -0.18
DDB1-218ENST00000540784 SNX13Q9Y5W8 968 aa13.94□□□□□ -0.18
DDB1-218ENST00000540784 GTF3C1Q12789 2109 aa13.94□□□□□ -0.18
DDB1-218ENST00000540784 DNAJC13O75165 2243 aa13.94□□□□□ -0.18
DDB1-218ENST00000540784 A0A1B0GWA3 101 aa13.93□□□□□ -0.18
DDB1-218ENST00000540784 ZNF208O43345 1280 aa13.93□□□□□ -0.18
DDB1-218ENST00000540784 DNAJC8O75937 253 aaPredicted RBP13.93□□□□□ -0.18
DDB1-218ENST00000540784 PDE5AO76074 875 aa13.93□□□□□ -0.18
DDB1-218ENST00000540784 AGFG2O95081 481 aa13.93□□□□□ -0.18
DDB1-218ENST00000540784 PNMTP11086 282 aa13.93□□□□□ -0.18
DDB1-218ENST00000540784 TNFRSF1BP20333 461 aa13.93□□□□□ -0.18
DDB1-218ENST00000540784 SHC1P29353 583 aa13.93□□□□□ -0.18
DDB1-218ENST00000540784 TRIM25Q14258 630 aaKnown RBP13.93□□□□□ -0.18
DDB1-218ENST00000540784 NPTX1Q15818 432 aa13.93□□□□□ -0.18
DDB1-218ENST00000540784 SYT14P1Q58G82 188 aa13.93□□□□□ -0.18
DDB1-218ENST00000540784 ALG10BQ5I7T1 473 aa13.93□□□□□ -0.18
DDB1-218ENST00000540784 ENTPD8Q5MY95 495 aa13.93□□□□□ -0.18
DDB1-218ENST00000540784 VTCN1Q7Z7D3 282 aa13.93□□□□□ -0.18
DDB1-218ENST00000540784 RPRMLQ8N4K4 120 aa13.93□□□□□ -0.18
DDB1-218ENST00000540784 OR10D3Q8NH80 312 aa13.93□□□□□ -0.18
DDB1-218ENST00000540784 PHF10Q8WUB8 498 aaKnown RBP13.93□□□□□ -0.18
DDB1-218ENST00000540784 RND1Q92730 232 aa13.93□□□□□ -0.18
DDB1-218ENST00000540784 WNT2BQ93097 391 aa13.93□□□□□ -0.18
DDB1-218ENST00000540784 C3orf49Q96BT1 292 aa13.93□□□□□ -0.18
DDB1-218ENST00000540784 DDIT4LQ96D03 193 aa13.93□□□□□ -0.18
DDB1-218ENST00000540784 SLC47A1Q96FL8 570 aa13.93□□□□□ -0.18
DDB1-218ENST00000540784 ADGRG7Q96K78 797 aa13.93□□□□□ -0.18
DDB1-218ENST00000540784 NSMCE2Q96MF7 247 aa13.93□□□□□ -0.18
DDB1-218ENST00000540784 OR5B2Q96R09 309 aa13.93□□□□□ -0.18
DDB1-218ENST00000540784 UCN2Q96RP3 112 aa13.93□□□□□ -0.18
DDB1-218ENST00000540784 PRRG4Q9BZD6 226 aa13.93□□□□□ -0.18
DDB1-218ENST00000540784 C12orf10Q9HB07 376 aa13.93□□□□□ -0.18
DDB1-218ENST00000540784 SAMD4AQ9UPU9 718 aaKnown RBP13.93□□□□□ -0.18
DDB1-218ENST00000540784 POLEQ07864 2286 aa13.93□□□□□ -0.18
DDB1-218ENST00000540784 HEATR5AQ86XA9 2040 aa13.92□□□□□ -0.18
DDB1-218ENST00000540784 A0A1W2PNR3 127 aa13.92□□□□□ -0.18
DDB1-218ENST00000540784 TMEM72A0PK05 275 aa13.92□□□□□ -0.18
DDB1-218ENST00000540784 ELOA3DA6NLF2 546 aaPredicted RBP13.92□□□□□ -0.18
DDB1-218ENST00000540784 CPSF4LA6NMK7 179 aaKnown RBP13.92□□□□□ -0.18
DDB1-218ENST00000540784 ARPC2O15144 300 aa13.92□□□□□ -0.18
DDB1-218ENST00000540784 GSC2O15499 205 aa13.92□□□□□ -0.18
DDB1-218ENST00000540784 CXCL13O43927 109 aa13.92□□□□□ -0.18
DDB1-218ENST00000540784 SYNGR4O95473 234 aa13.92□□□□□ -0.18
DDB1-218ENST00000540784 SMSP52788 366 aa13.92□□□□□ -0.18
DDB1-218ENST00000540784 NUP107P57740 925 aa13.92□□□□□ -0.18
DDB1-218ENST00000540784 CTU2Q2VPK5 515 aaKnown RBP13.92□□□□□ -0.18
DDB1-218ENST00000540784 ELOA3BQ3SY89 546 aa13.92□□□□□ -0.18
DDB1-218ENST00000540784 IFI44LQ53G44 452 aa13.92□□□□□ -0.18
DDB1-218ENST00000540784 ZNF613Q6PF04 617 aa13.92□□□□□ -0.18
DDB1-218ENST00000540784 CCDC121Q6ZUS5 278 aa13.92□□□□□ -0.18
DDB1-218ENST00000540784 P4HA3Q7Z4N8 544 aa13.92□□□□□ -0.18
DDB1-218ENST00000540784 ADGRE4PQ86SQ3 457 aa13.92□□□□□ -0.18
DDB1-218ENST00000540784 ATG4DQ86TL0 474 aaPredicted RBP13.92□□□□□ -0.18
DDB1-218ENST00000540784 DHFR2Q86XF0 187 aa13.92□□□□□ -0.18
DDB1-218ENST00000540784 FAM26EQ8N5C1 309 aa13.92□□□□□ -0.18
DDB1-218ENST00000540784 ELOA3Q8NG57 546 aa13.92□□□□□ -0.18
DDB1-218ENST00000540784 CCDC120Q96HB5 630 aa13.92□□□□□ -0.18
DDB1-218ENST00000540784 ZNF845Q96IR2 970 aaPredicted RBP13.92□□□□□ -0.18
DDB1-218ENST00000540784 CLPTM1LQ96KA5 538 aa13.92□□□□□ -0.18
DDB1-218ENST00000540784 TM9SF2Q99805 663 aa13.92□□□□□ -0.18
DDB1-218ENST00000540784 POTEKPQ9BYX7 375 aa13.92□□□□□ -0.18
DDB1-218ENST00000540784 MUC13Q9H3R2 512 aa13.92□□□□□ -0.18
DDB1-218ENST00000540784 ACTR3BQ9P1U1 418 aa13.92□□□□□ -0.18
DDB1-218ENST00000540784 HDGFL3Q9Y3E1 203 aa13.92□□□□□ -0.18
DDB1-218ENST00000540784 TRAPPC13A5PLN9 417 aa13.91□□□□□ -0.18
DDB1-218ENST00000540784 SLC22A20A6NK97 555 aa13.91□□□□□ -0.18
DDB1-218ENST00000540784 A8MVM7 634 aa13.91□□□□□ -0.18
DDB1-218ENST00000540784 KDM4EB2RXH2 506 aaPredicted RBP13.91□□□□□ -0.18
DDB1-218ENST00000540784 SULT2B1O00204 365 aa13.91□□□□□ -0.18
DDB1-218ENST00000540784 PRKD3O94806 890 aa13.91□□□□□ -0.18
DDB1-218ENST00000540784 STAMBPO95630 424 aa13.91□□□□□ -0.18
DDB1-218ENST00000540784 IL2RAP01589 272 aa13.91□□□□□ -0.18
DDB1-218ENST00000540784 IFNW1P05000 195 aa13.91□□□□□ -0.18
DDB1-218ENST00000540784 TIMP3P35625 211 aa13.91□□□□□ -0.18
DDB1-218ENST00000540784 CDH12P55289 794 aa13.91□□□□□ -0.18
DDB1-218ENST00000540784 RAC3P60763 192 aa13.91□□□□□ -0.18
DDB1-218ENST00000540784 PPP4R4Q6NUP7 873 aa13.91□□□□□ -0.18
DDB1-218ENST00000540784 DEF8Q6ZN54 512 aa13.91□□□□□ -0.18
DDB1-218ENST00000540784 TMPPEQ6ZT21 453 aa13.91□□□□□ -0.18
DDB1-218ENST00000540784 NCCRP1Q6ZVX7 275 aaPredicted RBP13.91□□□□□ -0.18
DDB1-218ENST00000540784 MARVELD2Q8N4S9 558 aa13.91□□□□□ -0.18
DDB1-218ENST00000540784 ADAMTS16Q8TE57 1224 aa13.91□□□□□ -0.18
DDB1-218ENST00000540784 GEMIN6Q8WXD5 167 aaKnown RBP13.91□□□□□ -0.18
DDB1-218ENST00000540784 SLC38A4Q969I6 547 aa13.91□□□□□ -0.18
DDB1-218ENST00000540784 PYURFQ96I23 114 aa13.91□□□□□ -0.18
DDB1-218ENST00000540784 HSH2DQ96JZ2 352 aa13.91□□□□□ -0.18
DDB1-218ENST00000540784 OR11A1Q9GZK7 315 aa13.91□□□□□ -0.18
DDB1-218ENST00000540784 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.91□□□□□ -0.18
DDB1-218ENST00000540784 MCTS1Q9ULC4 181 aaKnown RBP13.91□□□□□ -0.18
DDB1-218ENST00000540784 TRAPPC4Q9Y296 219 aa13.91□□□□□ -0.18
DDB1-218ENST00000540784 ZNF175Q9Y473 711 aa13.91□□□□□ -0.18
DDB1-218ENST00000540784 A0A0B4J2E0 115 aa13.9□□□□□ -0.18
DDB1-218ENST00000540784 A0A1B0GX12 115 aa13.9□□□□□ -0.18
DDB1-218ENST00000540784 TGM6O95932 706 aa13.9□□□□□ -0.18
DDB1-218ENST00000540784 IFNA8P32881 189 aa13.9□□□□□ -0.18
DDB1-218ENST00000540784 DIO1P49895 249 aa13.9□□□□□ -0.18
DDB1-218ENST00000540784 OR2B6P58173 313 aa13.9□□□□□ -0.18
DDB1-218ENST00000540784 TAS2R41P59536 307 aa13.9□□□□□ -0.18
DDB1-218ENST00000540784 CSNK2A1P68400 391 aaPredicted RBP13.9□□□□□ -0.18
DDB1-218ENST00000540784 MS4A2Q01362 244 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms