RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 RMND5AQ9H871 391 aa18.6■□□□□ 0.57
CHFR-217ENST00000540537 FAAHO00519 579 aa18.59■□□□□ 0.57
CHFR-217ENST00000540537 DNPH1O43598 174 aa18.59■□□□□ 0.57
CHFR-217ENST00000540537 DIAPH2O60879 1101 aa18.59■□□□□ 0.57
CHFR-217ENST00000540537 DBIP07108 87 aaKnown RBP18.59■□□□□ 0.57
CHFR-217ENST00000540537 IDH2P48735 452 aaKnown RBP18.59■□□□□ 0.57
CHFR-217ENST00000540537 MVDP53602 400 aa18.59■□□□□ 0.57
CHFR-217ENST00000540537 TSC22D1Q15714 1073 aa18.59■□□□□ 0.57
CHFR-217ENST00000540537 GALNT5Q7Z7M9 940 aa18.59■□□□□ 0.57
CHFR-217ENST00000540537 ADGRG3Q86Y34 549 aa18.59■□□□□ 0.57
CHFR-217ENST00000540537 HSD17B8Q92506 261 aa18.59■□□□□ 0.57
CHFR-217ENST00000540537 POTEKPQ9BYX7 375 aa18.59■□□□□ 0.57
CHFR-217ENST00000540537 SLC6A13Q9NSD5 602 aa18.59■□□□□ 0.57
CHFR-217ENST00000540537 EMC3Q9P0I2 261 aa18.59■□□□□ 0.57
CHFR-217ENST00000540537 P2RX2Q9UBL9 471 aa18.59■□□□□ 0.57
CHFR-217ENST00000540537 NIPBLQ6KC79 2804 aaeCLIP18.58■□□□□ 0.57
CHFR-217ENST00000540537 IGKV3D-15A0A087WSY6 115 aa18.58■□□□□ 0.56
CHFR-217ENST00000540537 ANP32DO95626 131 aa18.58■□□□□ 0.56
CHFR-217ENST00000540537 CNOT4O95628 575 aaKnown RBP18.58■□□□□ 0.56
CHFR-217ENST00000540537 IL7RP16871 459 aa18.58■□□□□ 0.56
CHFR-217ENST00000540537 POLR2JP52435 117 aaKnown RBP18.58■□□□□ 0.56
CHFR-217ENST00000540537 TAB1Q15750 504 aa18.58■□□□□ 0.56
CHFR-217ENST00000540537 MAPK11Q15759 364 aa18.58■□□□□ 0.56
CHFR-217ENST00000540537 Q5PR19 223 aa18.58■□□□□ 0.56
CHFR-217ENST00000540537 MRPL2Q5T653 305 aaKnown RBP18.58■□□□□ 0.56
CHFR-217ENST00000540537 ITCHQ96J02 903 aa18.58■□□□□ 0.56
CHFR-217ENST00000540537 ARL5BQ96KC2 179 aa18.58■□□□□ 0.56
CHFR-217ENST00000540537 NGBQ9NPG2 151 aa18.58■□□□□ 0.56
CHFR-217ENST00000540537 CALML5Q9NZT1 146 aa18.58■□□□□ 0.56
CHFR-217ENST00000540537 PRSS50Q9UI38 385 aa18.58■□□□□ 0.56
CHFR-217ENST00000540537 USH1CQ9Y6N9 552 aa18.58■□□□□ 0.56
CHFR-217ENST00000540537 DSPPQ9NZW4 1301 aa18.57■□□□□ 0.56
CHFR-217ENST00000540537 CFAP73A6NFT4 308 aa18.57■□□□□ 0.56
CHFR-217ENST00000540537 AP3D1O14617 1153 aa18.57■□□□□ 0.56
CHFR-217ENST00000540537 HS3ST1O14792 307 aa18.57■□□□□ 0.56
CHFR-217ENST00000540537 TMCC2O75069 709 aa18.57■□□□□ 0.56
CHFR-217ENST00000540537 PLAUP00749 431 aa18.57■□□□□ 0.56
CHFR-217ENST00000540537 UQCRBP14927 111 aa18.57■□□□□ 0.56
CHFR-217ENST00000540537 POLR2HP52434 150 aaKnown RBP18.57■□□□□ 0.56
CHFR-217ENST00000540537 MAP2K6P52564 334 aa18.57■□□□□ 0.56
CHFR-217ENST00000540537 EPS8Q12929 822 aa18.57■□□□□ 0.56
CHFR-217ENST00000540537 EPGNQ6UW88 154 aa18.57■□□□□ 0.56
CHFR-217ENST00000540537 PRSS57Q6UWY2 283 aa18.57■□□□□ 0.56
CHFR-217ENST00000540537 BHLHA15Q7RTS1 189 aaPredicted RBP18.57■□□□□ 0.56
CHFR-217ENST00000540537 PEX5LQ8IYB4 626 aa18.57■□□□□ 0.56
CHFR-217ENST00000540537 ZNF440Q8IYI8 595 aa18.57■□□□□ 0.56
CHFR-217ENST00000540537 MIER2Q8N344 545 aa18.57■□□□□ 0.56
CHFR-217ENST00000540537 OR9I1Q8NGQ6 314 aa18.57■□□□□ 0.56
CHFR-217ENST00000540537 PIGXQ8TBF5 258 aa18.57■□□□□ 0.56
CHFR-217ENST00000540537 IGFBPL1Q8WX77 278 aa18.57■□□□□ 0.56
CHFR-217ENST00000540537 ZNF775Q96BV0 537 aaPredicted RBP18.57■□□□□ 0.56
CHFR-217ENST00000540537 C7orf26Q96N11 449 aa18.57■□□□□ 0.56
CHFR-217ENST00000540537 OR11A1Q9GZK7 315 aa18.57■□□□□ 0.56
CHFR-217ENST00000540537 TPT1P8Q9HAU6 139 aa18.57■□□□□ 0.56
CHFR-217ENST00000540537 OSGIN1Q9UJX0 560 aa18.57■□□□□ 0.56
CHFR-217ENST00000540537 PRDM4Q9UKN5 801 aa18.57■□□□□ 0.56
CHFR-217ENST00000540537 TRAPPC4Q9Y296 219 aa18.57■□□□□ 0.56
CHFR-217ENST00000540537 CADP27708 2225 aa18.57■□□□□ 0.56
CHFR-217ENST00000540537 USF3Q68DE3 2245 aa18.56■□□□□ 0.56
CHFR-217ENST00000540537 TMED7-TICAM2A0A0A6YYA0 188 aa18.56■□□□□ 0.56
CHFR-217ENST00000540537 FAM234BA2RU67 622 aa18.56■□□□□ 0.56
CHFR-217ENST00000540537 ZNF716A6NP11 495 aa18.56■□□□□ 0.56
CHFR-217ENST00000540537 ZNF208O43345 1280 aa18.56■□□□□ 0.56
CHFR-217ENST00000540537 ETFAP13804 333 aa18.56■□□□□ 0.56
CHFR-217ENST00000540537 EDNRAP25101 427 aa18.56■□□□□ 0.56
CHFR-217ENST00000540537 SLC1A3P43003 542 aa18.56■□□□□ 0.56
CHFR-217ENST00000540537 CRATP43155 626 aa18.56■□□□□ 0.56
CHFR-217ENST00000540537 MRPL19P49406 292 aaKnown RBP18.56■□□□□ 0.56
CHFR-217ENST00000540537 CRISP3P54108 245 aa18.56■□□□□ 0.56
CHFR-217ENST00000540537 DSTNP60981 165 aa18.56■□□□□ 0.56
CHFR-217ENST00000540537 GTDC1Q4AE62 458 aa18.56■□□□□ 0.56
CHFR-217ENST00000540537 LIN52Q52LA3 116 aa18.56■□□□□ 0.56
CHFR-217ENST00000540537 ALKBH2Q6NS38 261 aa18.56■□□□□ 0.56
CHFR-217ENST00000540537 BIVMQ86UB2 503 aa18.56■□□□□ 0.56
CHFR-217ENST00000540537 ZNF100Q8IYN0 542 aa18.56■□□□□ 0.56
CHFR-217ENST00000540537 ZNF611Q8N823 705 aa18.56■□□□□ 0.56
CHFR-217ENST00000540537 DDIT4LQ96D03 193 aa18.56■□□□□ 0.56
CHFR-217ENST00000540537 C18orf12Q96KH6 178 aa18.56■□□□□ 0.56
CHFR-217ENST00000540537 GSX2Q9BZM3 304 aa18.56■□□□□ 0.56
CHFR-217ENST00000540537 GSX1Q9H4S2 264 aaPredicted RBP18.56■□□□□ 0.56
CHFR-217ENST00000540537 THUMPD1Q9NXG2 353 aaKnown RBP18.56■□□□□ 0.56
CHFR-217ENST00000540537 TMEM181Q9P2C4 612 aa18.56■□□□□ 0.56
CHFR-217ENST00000540537 TMED7Q9Y3B3 224 aa18.56■□□□□ 0.56
CHFR-217ENST00000540537 TMEM72A0PK05 275 aa18.55■□□□□ 0.56
CHFR-217ENST00000540537 CDHR4A6H8M9 788 aa18.55■□□□□ 0.56
CHFR-217ENST00000540537 GPR171O14626 319 aa18.55■□□□□ 0.56
CHFR-217ENST00000540537 LYZL6O75951 148 aa18.55■□□□□ 0.56
CHFR-217ENST00000540537 TGDSO95455 350 aa18.55■□□□□ 0.56
CHFR-217ENST00000540537 COX5AP20674 150 aa18.55■□□□□ 0.56
CHFR-217ENST00000540537 TACR3P29371 465 aa18.55■□□□□ 0.56
CHFR-217ENST00000540537 SLC16A1P53985 500 aa18.55■□□□□ 0.56
CHFR-217ENST00000540537 C6orf10Q5SRN2 563 aa18.55■□□□□ 0.56
CHFR-217ENST00000540537 NCMAPQ5T1S8 102 aa18.55■□□□□ 0.56
CHFR-217ENST00000540537 ADAM5Q6NVV9 412 aa18.55■□□□□ 0.56
CHFR-217ENST00000540537 SSX8Q7RTT4 187 aa18.55■□□□□ 0.56
CHFR-217ENST00000540537 OR52P1PQ8NH57 321 aa18.55■□□□□ 0.56
CHFR-217ENST00000540537 VPS33AQ96AX1 596 aa18.55■□□□□ 0.56
CHFR-217ENST00000540537 PERPQ96FX8 193 aa18.55■□□□□ 0.56
CHFR-217ENST00000540537 ESRP2Q9H6T0 727 aaKnown RBP18.55■□□□□ 0.56
CHFR-217ENST00000540537 NOSIPQ9Y314 301 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms