RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 LSM7Q9UK45 103 aaKnown RBP8.79□□□□□ -1
CTNNA1-243ENST00000540387 ENPP4Q9Y6X5 453 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 A0A087X0M5 115 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 A0A1B0GX30 115 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 TRAPPC13A5PLN9 417 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 FAM221BA6H8Z2 402 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 LOC730098B7Z3J9 87 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 YY2O15391 372 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 ITGA10O75578 1167 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 GUCA1CO95843 209 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 PIRTP0C851 137 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 G0S2P27469 103 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 SHC1P29353 583 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 CSNK1EP49674 416 aaKnown RBP8.78□□□□□ -1
CTNNA1-243ENST00000540387 CASP9P55211 416 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 SHC2P98077 582 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 SORDQ00796 357 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 BOP1Q14137 746 aaKnown RBP8.78□□□□□ -1
CTNNA1-243ENST00000540387 DCAF12L2Q5VW00 463 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 RAB12Q6IQ22 244 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 CXorf57Q6NSI4 855 aaKnown RBP8.78□□□□□ -1
CTNNA1-243ENST00000540387 ESPNLQ6ZVH7 1005 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 NPAS3Q8IXF0 933 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 PRR18Q8N4B5 295 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 FBXO15Q8NCQ5 510 aaPredicted RBP8.78□□□□□ -1
CTNNA1-243ENST00000540387 OR4Q3Q8NH05 313 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 GEMIN6Q8WXD5 167 aaKnown RBP8.78□□□□□ -1
CTNNA1-243ENST00000540387 OSTF1Q92882 214 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 RAB3CQ96E17 227 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 CNTNAP3BQ96NU0 1288 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 PIGQQ9BRB3 760 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 SUV39H2Q9H5I1 410 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 TMEM231Q9H6L2 316 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 TREM1Q9NP99 234 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 MRPS18AQ9NVS2 196 aaKnown RBP8.78□□□□□ -1
CTNNA1-243ENST00000540387 TMEM248Q9NWD8 314 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 ELOVL2Q9NXB9 296 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 MARCH11A6NNE9 402 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 TAPBPO15533 448 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 GSTZ1O43708 216 aaPredicted RBP8.78□□□□□ -1
CTNNA1-243ENST00000540387 C6orf47O95873 294 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 IL5P05113 134 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 CD2P06729 351 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 OR1E1P30953 314 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 VIPR2P41587 438 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 RAB5CP51148 216 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 CCR8P51685 355 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 ART1P52961 327 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 C21orf58P58505 322 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 CXADRP78310 365 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 RPP30P78346 268 aaKnown RBP8.78□□□□□ -1
CTNNA1-243ENST00000540387 ELFN2Q5R3F8 820 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 SLC25A30Q5SVS4 291 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 ANGPTL8Q6UXH0 198 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 BAIAP2L2Q6UXY1 529 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 MBOAT1Q6ZNC8 495 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 TPGS1Q6ZTW0 290 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 RASGEF1AQ8N9B8 481 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 CCDC54Q8NEL0 328 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 SMAP2Q8WU79 429 aaPredicted RBP8.78□□□□□ -1
CTNNA1-243ENST00000540387 SMIM4Q8WVI0 70 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 OCSTAMPQ9BR26 566 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 POLR2J3Q9H1A7 115 aaKnown RBP8.78□□□□□ -1
CTNNA1-243ENST00000540387 S1PR5Q9H228 398 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 CHRDQ9H2X0 955 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 CCDC88CQ9P219 2028 aa8.78□□□□□ -1
CTNNA1-243ENST00000540387 TMEM265A0A087WTH1 108 aa8.77□□□□□ -1
CTNNA1-243ENST00000540387 A0A0D9SEW6 157 aa8.77□□□□□ -1
CTNNA1-243ENST00000540387 OR14I1A6ND48 311 aa8.77□□□□□ -1
CTNNA1-243ENST00000540387 FFAR2O15552 330 aa8.77□□□□□ -1
CTNNA1-243ENST00000540387 PRMT3O60678 531 aa8.77□□□□□ -1
CTNNA1-243ENST00000540387 MED6O75586 246 aa8.77□□□□□ -1
CTNNA1-243ENST00000540387 RGS9O75916 674 aaPredicted RBP8.77□□□□□ -1
CTNNA1-243ENST00000540387 PDYNP01213 254 aa8.77□□□□□ -1
CTNNA1-243ENST00000540387 IFNA10P01566 189 aa8.77□□□□□ -1
CTNNA1-243ENST00000540387 UCHL1P09936 223 aa8.77□□□□□ -1
CTNNA1-243ENST00000540387 SAGP10523 405 aaPredicted RBP8.77□□□□□ -1
CTNNA1-243ENST00000540387 TIMP2P16035 220 aa8.77□□□□□ -1
CTNNA1-243ENST00000540387 HIST1H1BP16401 226 aaKnown RBP8.77□□□□□ -1
CTNNA1-243ENST00000540387 NUTF2P61970 127 aaKnown RBP8.77□□□□□ -1
CTNNA1-243ENST00000540387 SLC25A35Q3KQZ1 300 aa8.77□□□□□ -1
CTNNA1-243ENST00000540387 PLEKHN1Q494U1 663 aaPredicted RBP8.77□□□□□ -1
CTNNA1-243ENST00000540387 FAM78AQ5JUQ0 283 aa8.77□□□□□ -1
CTNNA1-243ENST00000540387 HEPHL1Q6MZM0 1159 aa8.77□□□□□ -1
CTNNA1-243ENST00000540387 GPBAR1Q8TDU6 330 aa8.77□□□□□ -1
CTNNA1-243ENST00000540387 SORCS1Q8WY21 1168 aa8.77□□□□□ -1
CTNNA1-243ENST00000540387 RSPRY1Q96DX4 576 aa8.77□□□□□ -1
CTNNA1-243ENST00000540387 CDKN2AIPNLQ96HQ2 116 aa8.77□□□□□ -1
CTNNA1-243ENST00000540387 TEFMQ96QE5 360 aaKnown RBP8.77□□□□□ -1
CTNNA1-243ENST00000540387 ZNF559Q9BR84 538 aa8.77□□□□□ -1
CTNNA1-243ENST00000540387 KLHL31Q9H511 634 aa8.77□□□□□ -1
CTNNA1-243ENST00000540387 TMEM185BQ9H7F4 350 aa8.77□□□□□ -1
CTNNA1-243ENST00000540387 ACKR4Q9NPB9 350 aa8.77□□□□□ -1
CTNNA1-243ENST00000540387 VSX1Q9NZR4 365 aaPredicted RBP8.77□□□□□ -1
CTNNA1-243ENST00000540387 TRBV23OR9-2A0A075B6M9 112 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 TMEM72A0PK05 275 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 IRGMA1A4Y4 181 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 UPK3BL1B0FP48 263 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 UPK3BL2E5RIL1 263 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 E7EQ34 232 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms