RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 TFPIP10646 304 aa10.13□□□□□ -0.79
CLSTN3-209ENST00000539982 UBL4AP11441 157 aa10.13□□□□□ -0.79
CLSTN3-209ENST00000539982 ECHS1P30084 290 aa10.13□□□□□ -0.79
CLSTN3-209ENST00000539982 DVL1P1P54792 670 aaPredicted RBP10.13□□□□□ -0.79
CLSTN3-209ENST00000539982 ACTG1P63261 375 aa10.13□□□□□ -0.79
CLSTN3-209ENST00000539982 MERTKQ12866 999 aa10.13□□□□□ -0.79
CLSTN3-209ENST00000539982 TIFABQ6ZNK6 161 aa10.13□□□□□ -0.79
CLSTN3-209ENST00000539982 SPATA19Q7Z5L4 167 aa10.13□□□□□ -0.79
CLSTN3-209ENST00000539982 CCDC103Q8IW40 242 aa10.13□□□□□ -0.79
CLSTN3-209ENST00000539982 CCNYL1Q8N7R7 359 aa10.13□□□□□ -0.79
CLSTN3-209ENST00000539982 TMEM234Q8WY98 164 aa10.13□□□□□ -0.79
CLSTN3-209ENST00000539982 GCDHQ92947 438 aaPredicted RBP10.13□□□□□ -0.79
CLSTN3-209ENST00000539982 CCT7Q99832 543 aa10.13□□□□□ -0.79
CLSTN3-209ENST00000539982 ACTRT3Q9BYD9 372 aa10.13□□□□□ -0.79
CLSTN3-209ENST00000539982 LAT2Q9GZY6 243 aa10.13□□□□□ -0.79
CLSTN3-209ENST00000539982 PLK3Q9H4B4 646 aa10.13□□□□□ -0.79
CLSTN3-209ENST00000539982 METTL17Q9H7H0 456 aaPredicted RBP10.13□□□□□ -0.79
CLSTN3-209ENST00000539982 CA10Q9NS85 328 aa10.13□□□□□ -0.79
CLSTN3-209ENST00000539982 SIRT3Q9NTG7 399 aaPredicted RBP10.13□□□□□ -0.79
CLSTN3-209ENST00000539982 ACER3Q9NUN7 267 aa10.13□□□□□ -0.79
CLSTN3-209ENST00000539982 C1orf109Q9NX04 203 aa10.13□□□□□ -0.79
CLSTN3-209ENST00000539982 FBXO9Q9UK97 447 aaPredicted RBP10.13□□□□□ -0.79
CLSTN3-209ENST00000539982 KCNE3Q9Y6H6 103 aa10.13□□□□□ -0.79
CLSTN3-209ENST00000539982 SERINC4A6NH21 518 aa10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 SLC28A1O00337 649 aa10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 DNPH1O43598 174 aa10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 CYP7B1O75881 506 aa10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 PDE5AO76074 875 aa10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 PMS2P2O95744 297 aa10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 GSTA1P08263 222 aa10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 DAOP14920 347 aa10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 SDC1P18827 310 aa10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 EFNA1P20827 205 aaPredicted RBP10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 FKBP2P26885 142 aaKnown RBP10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 APOBEC1P41238 236 aaKnown RBP10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 MAGEA8P43361 318 aa10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 CCT3P49368 545 aaKnown RBP10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 PPOXP50336 477 aa10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 IDH3GP51553 393 aaPredicted RBP10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 NAA20P61599 178 aa10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 SKP2Q13309 424 aa10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 EFNB3Q15768 340 aa10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 ADIPOQQ15848 244 aa10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 EMBQ6PCB8 327 aa10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 RINLQ6ZS11 566 aa10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 ZNF786Q8N393 782 aa10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 AENQ8WTP8 325 aaKnown RBP10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 FAM216AQ8WUB2 273 aa10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 NEU4Q8WWR8 484 aaPredicted RBP10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 MTERF3Q96E29 417 aa10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 CCDC126Q96EE4 140 aa10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 BOD1Q96IK1 185 aa10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 FCRL1Q96LA6 429 aa10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 TSSK3Q96PN8 268 aa10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 SNX18Q96RF0 628 aa10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 CDC42EP4Q9H3Q1 356 aaKnown RBP10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 SLC7A10Q9NS82 523 aa10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 BAIAP2L1Q9UHR4 511 aa10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 FAF1Q9UNN5 650 aaPredicted RBP10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 HDGFL3Q9Y3E1 203 aa10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 SPIN1Q9Y657 262 aaPredicted RBP10.12□□□□□ -0.79
CLSTN3-209ENST00000539982 IGHV1-18A0A0C4DH31 117 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 FAM157AC9JC47 383 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 KLF11O14901 512 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 CRYAAP02489 173 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 ERCC1P07992 297 aaPredicted RBP10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 KRT16P08779 473 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 OR4A8P0C604 315 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 UROSP10746 265 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 DDX5P17844 614 aaKnown RBP10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 PGCP20142 388 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 PAX7P23759 505 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 MPGP29372 298 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 CLK1P49759 484 aaKnown RBP10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 H3F3AP84243 136 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 LGALS3BPQ08380 585 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 SCGB2A2Q13296 93 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 BEND6Q5SZJ8 279 aaPredicted RBP10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 PDZK1Q5T2W1 519 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 TSPO2Q5TGU0 170 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 KLHL24Q6TFL4 600 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 CASP12Q6UXS9 341 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 R3HCC1LQ7Z5L2 792 aaKnown RBP10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 ZNF418Q8TF45 676 aaPredicted RBP10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 ARL5BQ96KC2 179 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 SDF2Q99470 211 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 FMO2Q99518 471 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 KCNS3Q9BQ31 491 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 CCDC106Q9BWC9 280 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 NMUR2Q9GZQ4 415 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 TSPYL1Q9H0U9 437 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 TNFRSF12AQ9NP84 129 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 OBP2BQ9NPH6 170 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 GPATCH2Q9NW75 528 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 CHRNA9Q9UGM1 479 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 TRAPPC4Q9Y296 219 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 SLC9A8Q9Y2E8 581 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 PCDHB14Q9Y5E9 798 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 FLVCR1Q9Y5Y0 555 aa10.11□□□□□ -0.79
CLSTN3-209ENST00000539982 B4DSR2 109 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms