RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 FBXL3Q9UKT7 428 aa12.24□□□□□ -0.45
UBE3B-209ENST00000539584 MRPS7Q9Y2R9 242 aaKnown RBP12.24□□□□□ -0.45
UBE3B-209ENST00000539584 GXYLT2A0PJZ3 443 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 OR52A4PA6NMU1 304 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 BET1O15155 118 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 MRPL3P09001 348 aaKnown RBP12.23□□□□□ -0.45
UBE3B-209ENST00000539584 RAB40ALP0C0E4 278 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 SNRPBP14678 240 aaKnown RBP12.23□□□□□ -0.45
UBE3B-209ENST00000539584 EPCAMP16422 314 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 MAT2AP31153 395 aaKnown RBP12.23□□□□□ -0.45
UBE3B-209ENST00000539584 MNDAP41218 407 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 MAP3K8P41279 467 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 SRP54P61011 504 aaKnown RBP12.23□□□□□ -0.45
UBE3B-209ENST00000539584 PUDPQ08623 228 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 KIR2DS3Q14952 304 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 KIAA1324Q6UXG2 1013 aaKnown RBP12.23□□□□□ -0.45
UBE3B-209ENST00000539584 ADGRG3Q86Y34 549 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 FAM20CQ8IXL6 584 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 ZNF687Q8N1G0 1237 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 LSMEM1Q8N8F7 131 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 KCT2Q8NC54 265 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 CAMKVQ8NCB2 501 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 ZFPM2Q8WW38 1151 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 LCN9Q8WX39 176 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 RAB40AQ8WXH6 277 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 ZNF707Q96C28 371 aaPredicted RBP12.23□□□□□ -0.45
UBE3B-209ENST00000539584 PELI1Q96FA3 418 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 NARFLQ9H6Q4 476 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 MEPEQ9NQ76 525 aaPredicted RBP12.23□□□□□ -0.45
UBE3B-209ENST00000539584 KLHL9Q9P2J3 617 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 RPS6KB2Q9UBS0 482 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 ICAM5Q9UMF0 924 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 MDC1Q14676 2089 aaKnown RBP12.23□□□□□ -0.45
UBE3B-209ENST00000539584 A0A1B0GVC2 190 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 A0A1W2PRG6 482 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 A6NIN4 97 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 I3L521 148 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 M0R233 179 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 AIPO00170 330 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 MID1O15344 667 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 TPD52L2O43399 206 aaKnown RBP12.23□□□□□ -0.45
UBE3B-209ENST00000539584 TNFSF14O43557 240 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 PAK4O96013 591 aaPredicted RBP12.23□□□□□ -0.45
UBE3B-209ENST00000539584 GKN3PP0CG01 181 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 CCL5P13501 91 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 VIPR2P41587 438 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 MNX1P50219 401 aaPredicted RBP12.23□□□□□ -0.45
UBE3B-209ENST00000539584 CCR6P51684 374 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 POU6F2P78424 691 aaPredicted RBP12.23□□□□□ -0.45
UBE3B-209ENST00000539584 MANEAQ5SRI9 462 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 UBE2Q1Q7Z7E8 422 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 OR2T35Q8NGX2 323 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 OR51Q1Q8NH59 317 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 OR14A16Q8NHC5 309 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 SPPL3Q8TCT6 385 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 RPS4Y2Q8TD47 263 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 ZNF296Q8WUU4 475 aaPredicted RBP12.23□□□□□ -0.45
UBE3B-209ENST00000539584 SNX33Q8WV41 574 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 RSC1A1Q92681 617 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 DACT3Q96B18 629 aaPredicted RBP12.23□□□□□ -0.45
UBE3B-209ENST00000539584 UTP23Q9BRU9 249 aaKnown RBP12.23□□□□□ -0.45
UBE3B-209ENST00000539584 TMPRSS13Q9BYE2 586 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 NPDC1Q9NQX5 325 aaPredicted RBP12.23□□□□□ -0.45
UBE3B-209ENST00000539584 MED9Q9NWA0 146 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 RWDD3Q9Y3V2 267 aa12.23□□□□□ -0.45
UBE3B-209ENST00000539584 ARPC4-TTLL3A0A0A6YYG9 625 aa12.22□□□□□ -0.45
UBE3B-209ENST00000539584 TRBV2A0A0J9YWF9 115 aa12.22□□□□□ -0.45
UBE3B-209ENST00000539584 SNRPGP15A8MWD9 76 aa12.22□□□□□ -0.45
UBE3B-209ENST00000539584 OR7A10O76100 309 aa12.22□□□□□ -0.45
UBE3B-209ENST00000539584 NDUFB2O95178 105 aa12.22□□□□□ -0.45
UBE3B-209ENST00000539584 PPP1R3DO95685 299 aa12.22□□□□□ -0.45
UBE3B-209ENST00000539584 IL5P05113 134 aa12.22□□□□□ -0.45
UBE3B-209ENST00000539584 SRMP19623 302 aa12.22□□□□□ -0.45
UBE3B-209ENST00000539584 MECP2P51608 486 aaKnown RBP12.22□□□□□ -0.45
UBE3B-209ENST00000539584 SCAND1P57086 179 aa12.22□□□□□ -0.45
UBE3B-209ENST00000539584 IL10RAQ13651 578 aa12.22□□□□□ -0.45
UBE3B-209ENST00000539584 ENPP2Q13822 863 aa12.22□□□□□ -0.45
UBE3B-209ENST00000539584 MFSD13AQ14CX5 517 aa12.22□□□□□ -0.45
UBE3B-209ENST00000539584 PON3Q15166 354 aa12.22□□□□□ -0.45
UBE3B-209ENST00000539584 RPTNQ6XPR3 784 aa12.22□□□□□ -0.45
UBE3B-209ENST00000539584 COMMD7Q86VX2 200 aa12.22□□□□□ -0.45
UBE3B-209ENST00000539584 SP7Q8TDD2 431 aaPredicted RBP12.22□□□□□ -0.45
UBE3B-209ENST00000539584 HOXB13Q92826 284 aaPredicted RBP12.22□□□□□ -0.45
UBE3B-209ENST00000539584 SMARCD2Q92925 531 aa12.22□□□□□ -0.45
UBE3B-209ENST00000539584 DPCDQ9BVM2 203 aaPredicted RBP12.22□□□□□ -0.45
UBE3B-209ENST00000539584 TWSG1Q9GZX9 223 aa12.22□□□□□ -0.45
UBE3B-209ENST00000539584 GPN1Q9HCN4 374 aaPredicted RBP12.22□□□□□ -0.45
UBE3B-209ENST00000539584 CHRNA9Q9UGM1 479 aa12.22□□□□□ -0.45
UBE3B-209ENST00000539584 PRRC2BQ5JSZ5 2229 aaKnown RBP12.22□□□□□ -0.45
UBE3B-209ENST00000539584 CENPVL1A0A0U1RR11 272 aa12.21□□□□□ -0.45
UBE3B-209ENST00000539584 OTOL1A6NHN0 477 aaPredicted RBP12.21□□□□□ -0.45
UBE3B-209ENST00000539584 KRT33AO76009 404 aa12.21□□□□□ -0.45
UBE3B-209ENST00000539584 WNT1P04628 370 aa12.21□□□□□ -0.45
UBE3B-209ENST00000539584 HOXC4P09017 264 aaPredicted RBP12.21□□□□□ -0.45
UBE3B-209ENST00000539584 GIPP09681 153 aaPredicted RBP12.21□□□□□ -0.45
UBE3B-209ENST00000539584 ANKRD34CP0C6C1 535 aa12.21□□□□□ -0.45
UBE3B-209ENST00000539584 CALCBP10092 127 aa12.21□□□□□ -0.45
UBE3B-209ENST00000539584 IFNGR1P15260 489 aa12.21□□□□□ -0.45
UBE3B-209ENST00000539584 FUT1P19526 365 aa12.21□□□□□ -0.45
UBE3B-209ENST00000539584 CLDN2P57739 230 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms