RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 OGFRL1Q5TC84 451 aaPredicted RBP11.7□□□□□ -0.54
CCDC42-202ENST00000539522 RAET1LQ5VY80 246 aa11.7□□□□□ -0.54
CCDC42-202ENST00000539522 HMBOX1Q6NT76 420 aa11.7□□□□□ -0.54
CCDC42-202ENST00000539522 WDR88Q6ZMY6 472 aa11.7□□□□□ -0.54
CCDC42-202ENST00000539522 ADGRE4PQ86SQ3 457 aa11.7□□□□□ -0.54
CCDC42-202ENST00000539522 ZDHHC21Q8IVQ6 265 aa11.7□□□□□ -0.54
CCDC42-202ENST00000539522 LSMEM1Q8N8F7 131 aa11.7□□□□□ -0.54
CCDC42-202ENST00000539522 OR5M9Q8NGP3 310 aa11.7□□□□□ -0.54
CCDC42-202ENST00000539522 VANGL1Q8TAA9 524 aaPredicted RBP11.7□□□□□ -0.54
CCDC42-202ENST00000539522 GEMIN6Q8WXD5 167 aaKnown RBP11.7□□□□□ -0.54
CCDC42-202ENST00000539522 ST8SIA1Q92185 356 aa11.7□□□□□ -0.54
CCDC42-202ENST00000539522 PROX1Q92786 737 aa11.7□□□□□ -0.54
CCDC42-202ENST00000539522 ABTB1Q969K4 478 aaPredicted RBP11.7□□□□□ -0.54
CCDC42-202ENST00000539522 C7orf34Q96L11 122 aa11.7□□□□□ -0.54
CCDC42-202ENST00000539522 SFXN2Q96NB2 322 aa11.7□□□□□ -0.54
CCDC42-202ENST00000539522 ZNF347Q96SE7 839 aa11.7□□□□□ -0.54
CCDC42-202ENST00000539522 AMBRA1Q9C0C7 1298 aa11.7□□□□□ -0.54
CCDC42-202ENST00000539522 KLHL4Q9C0H6 718 aa11.7□□□□□ -0.54
CCDC42-202ENST00000539522 SEMA6AQ9H2E6 1030 aa11.7□□□□□ -0.54
CCDC42-202ENST00000539522 ARMC7Q9H6L4 198 aa11.7□□□□□ -0.54
CCDC42-202ENST00000539522 LDAHQ9H6V9 325 aa11.7□□□□□ -0.54
CCDC42-202ENST00000539522 OSGIN1Q9UJX0 560 aa11.7□□□□□ -0.54
CCDC42-202ENST00000539522 MPDZO75970 2070 aa11.7□□□□□ -0.54
CCDC42-202ENST00000539522 PHF3Q92576 2039 aaKnown RBP11.69□□□□□ -0.54
CCDC42-202ENST00000539522 IGKV1D-42A0A075B6H8 117 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 A0A0J9YW62 118 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 TMEM72A0PK05 275 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 ZC3H12DA2A288 527 aaKnown RBP11.69□□□□□ -0.54
CCDC42-202ENST00000539522 OR14I1A6ND48 311 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 EIF4E1BA6NMX2 242 aaKnown RBP11.69□□□□□ -0.54
CCDC42-202ENST00000539522 H3BML4 177 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 FFAR1O14842 300 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 PRSS23O95084 383 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 NUDT14O95848 222 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 ACTL6AO96019 429 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 STSP08842 583 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 RNF224P0DH78 156 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 CPN1P15169 458 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 PGCP20142 388 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 ADH6P28332 368 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 TACR3P29371 465 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 SLC1A3P43003 542 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 SLC6A8P48029 635 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 KCNC4Q03721 635 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 C1QL3Q5VWW1 255 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 C3P1Q6ZMU1 363 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 ZNF550Q7Z398 422 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 ZNF605Q86T29 641 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 ATG4DQ86TL0 474 aaPredicted RBP11.69□□□□□ -0.54
CCDC42-202ENST00000539522 CD163Q86VB7 1156 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 CARM1Q86X55 608 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 ZNF440Q8IYI8 595 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 MRGPRX4Q96LA9 322 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 PIGQQ9BRB3 760 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 TMEM185BQ9H7F4 350 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 COQ10BQ9H8M1 238 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 EVA1AQ9H8M9 152 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 C8orf4Q9NR00 106 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 PRDM4Q9UKN5 801 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 OSGIN2Q9Y236 505 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 SH3GLB1Q9Y371 365 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 FAM32AQ9Y421 112 aaKnown RBP11.69□□□□□ -0.54
CCDC42-202ENST00000539522 HIVEP3Q5T1R4 2406 aa11.69□□□□□ -0.54
CCDC42-202ENST00000539522 NCOA6Q14686 2063 aaPredicted RBP11.69□□□□□ -0.54
CCDC42-202ENST00000539522 A0A0B4J2E0 115 aa11.68□□□□□ -0.54
CCDC42-202ENST00000539522 A0A1B0GWA3 101 aa11.68□□□□□ -0.54
CCDC42-202ENST00000539522 A0A1B0GX12 115 aa11.68□□□□□ -0.54
CCDC42-202ENST00000539522 J3KTA2 159 aa11.68□□□□□ -0.54
CCDC42-202ENST00000539522 NPIPB7O75200 414 aa11.68□□□□□ -0.54
CCDC42-202ENST00000539522 TOXO94900 526 aa11.68□□□□□ -0.54
CCDC42-202ENST00000539522 MT-ND1P03886 318 aa11.68□□□□□ -0.54
CCDC42-202ENST00000539522 PEPDP12955 493 aa11.68□□□□□ -0.54
CCDC42-202ENST00000539522 RGS8P57771 180 aaPredicted RBP11.68□□□□□ -0.54
CCDC42-202ENST00000539522 EGR4Q05215 589 aa11.68□□□□□ -0.54
CCDC42-202ENST00000539522 MERTKQ12866 999 aa11.68□□□□□ -0.54
CCDC42-202ENST00000539522 OR1Q1Q15612 314 aa11.68□□□□□ -0.54
CCDC42-202ENST00000539522 ENTPD8Q5MY95 495 aa11.68□□□□□ -0.54
CCDC42-202ENST00000539522 LPCAT4Q643R3 524 aa11.68□□□□□ -0.54
CCDC42-202ENST00000539522 OR2T5Q6IEZ7 315 aa11.68□□□□□ -0.54
CCDC42-202ENST00000539522 LINC00114Q6XXX2 140 aa11.68□□□□□ -0.54
CCDC42-202ENST00000539522 ZBTB49Q6ZSB9 765 aa11.68□□□□□ -0.54
CCDC42-202ENST00000539522 GRINAQ7Z429 371 aa11.68□□□□□ -0.54
CCDC42-202ENST00000539522 OR2T29Q8NH02 315 aa11.68□□□□□ -0.54
CCDC42-202ENST00000539522 EME1Q96AY2 570 aa11.68□□□□□ -0.54
CCDC42-202ENST00000539522 ZNF845Q96IR2 970 aaPredicted RBP11.68□□□□□ -0.54
CCDC42-202ENST00000539522 TUBA1CQ9BQE3 449 aa11.68□□□□□ -0.54
CCDC42-202ENST00000539522 PRSS27Q9BQR3 290 aa11.68□□□□□ -0.54
CCDC42-202ENST00000539522 C9orf16Q9BUW7 83 aa11.68□□□□□ -0.54
CCDC42-202ENST00000539522 OR11A1Q9GZK7 315 aa11.68□□□□□ -0.54
CCDC42-202ENST00000539522 VCXQ9H320 206 aa11.68□□□□□ -0.54
CCDC42-202ENST00000539522 NTN4Q9HB63 628 aa11.68□□□□□ -0.54
CCDC42-202ENST00000539522 KLHL28Q9NXS3 571 aa11.68□□□□□ -0.54
CCDC42-202ENST00000539522 TESQ9UGI8 421 aaKnown RBP11.68□□□□□ -0.54
CCDC42-202ENST00000539522 SLC13A4Q9UKG4 626 aa11.68□□□□□ -0.54
CCDC42-202ENST00000539522 A4GNTQ9UNA3 340 aa11.68□□□□□ -0.54
CCDC42-202ENST00000539522 SLC9A8Q9Y2E8 581 aa11.68□□□□□ -0.54
CCDC42-202ENST00000539522 LRRC42Q9Y546 428 aa11.68□□□□□ -0.54
CCDC42-202ENST00000539522 HELZ2Q9BYK8 2649 aaKnown RBP11.67□□□□□ -0.54
CCDC42-202ENST00000539522 TMED7-TICAM2A0A0A6YYA0 188 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 CLEC18AA5D8T8 446 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms